Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019402.1 Length=76631 Score E Sequences producing significant alignments: (Bits) Value seq309203 172 3e-38 seq437693 141 5e-29 seq509583 122 4e-23 >seq309203 Length=1072 Score = 172 bits (190), Expect = 3e-38 Identities = 408/611 (67%), Gaps = 13/611 (2%) Strand=Plus/Plus Query 13836 CCTATTCCTGACACTCCTAAACGTTATATCTGTAACTGGATTATAAACGGTAAAGAGCCT 13895 |||||||||||||| ||| |||||| | ||||||||||||||||| ||||| |||||| Sbjct 273 CCTATTCCTGACACACCTCAACGTTGGGTTTGTAACTGGATTATAAATGGTAAGGAGCCT 332 Query 13896 GTCTTGGCTAACTGGCCTTTGGCTGAAGATGGTT-ACCCAACTCATGGTGGATTCCAAGG 13954 || |||| |||| || || || || |||| ||||||||||| ||| | || Sbjct 333 GTACTGGCAAACTATCCA----CTCAACCCCATTGACCCTACTCATGGTGGTTTCAAGGG 388 Query 13955 TGAGATGTTAAATTGGACAAACGGTAAAACTCAGATTCCTCATGGTGCTCCATATTGGGG 14014 | |||| ||||| ||||| || | |||||| | |||||||| || ||||| Sbjct 389 TATACCACTAAACTGGACTAACGGACTTACCAAAATTCCTAAGGGTGCTCCTTACTGGGG 448 Query 14015 TGAATATCTTGATAAATTTACCTTTGCCTTTGATGGTGCTTTAGGTTGGAAATCAATTGT 14074 ||| ||| | ||| | ||||||||| ||||||||||||||| | | || || Sbjct 449 TGAGTATTTAGATGTAGCTACCTTTGCTTTTGATGGTGCTTTATCATATGACTCTATCAA 508 Query 14075 TGCTACTGTTTACGGCT-TGAAGGATGATGGTGTTACAACAGATTGGGATAAGAAAGGAA 14133 || | || ||| |||| | || |||||| | | || |||||||||| | || Sbjct 509 GGCAAGTG-TTAAGGCTCTTAAACCTGATGG---TTCTACTGATTGGGATAGTGATGGTG 564 Query 14134 CTCAGTATGATGTTGATTGGGTGATTGCTTATACTGGTCAGAAGATTGATTGGGATGGTA 14193 ||||||| || |||||| | || | |||||| | ||| | ||||||||||| Sbjct 565 TAAAGTATGACGTAGATTGGATAATCCTGTGGACTGGTGACAAGGTAGATTGGGATGGAG 624 Query 14194 ATGTAATTTCTGAAGGGCATCCAGTCTCCGAGATTGGCACTGTTCAGTTGAAAAACACAT 14253 ||||||| ||| || ||| ||| |||| || ||||| || | || | ||| Sbjct 625 ATGTAATATCTTCTGGTCATACAGAAGAGGAGAAAGGTACTGTACAACTAAAGGATACAA 684 Query 14254 CTGTCAATGGTCAGCACAAAGCTAACTGGTGTAATCGTCAACCTGTAGAACATGGTGGTT 14313 | || | || || || ||||| | ||| | ||| |||| ||||| || | Sbjct 685 CCGTACAAGGCATACATAAGTTTAACTTTGCCACACGTAACCCTCTAGAGCATGGCGGCT 744 Query 14314 ATCTTATGGGTCGTAACAAACCTTGGCATAACCGACCAATGAACGTTCCCGTTGAAGGTA 14373 ||||||| | | || |||| | |||||| |||| || | ||| | | || || Sbjct 745 ATCTTATTGACAGAAATGAACCGTTCCATAACAGACCTATACATACTCCACTAGGAGATA 804 Query 14374 CTTT---GAACTTTGGTAACGCATCAGATGCCGAACAGTGGTTCTTAGATGCTGCTTATG 14430 | | ||| | ||||| || | |||| || |||||||||||||| |||| Sbjct 805 TTGTAAACAACCTAGGTAATGCTGCCGATGGTGAGGTTTGGTTCTTAGATGCGTGTTATC 864 Query 14431 TGATGTGGAAG 14441 | | |||||| Sbjct 865 TTCTTTGGAAG 875 >seq437693 Length=1718 Score = 141 bits (156), Expect = 5e-29 Identities = 404/612 (66%), Gaps = 17/612 (3%) Strand=Plus/Plus Query 13836 CCTATTCCTGACACTCCTAAACGTTATATCTGTAACTGGATTATAAACGGTAAAGAGCCT 13895 ||||| ||||| || ||| |||||| | |||||||||||||| ||||| ||||||||| Sbjct 498 CCTATACCTGATACACCTCAACGTTGGGTATGTAACTGGATTATTAACGGCAAAGAGCCT 557 Query 13896 GTCTTGGCTAACTGGCCTTTGGCTGAAGATGGTTACCCAACTCATGGTGGATTCCAAGGT 13955 || | ||||||| ||| | | | | | |||| |||| || |||||| |||| Sbjct 558 GTGCTAGCTAACTACCCTATCG---ACCCTATTGACCCTTCTCACGGAGGATTCAAAGGC 614 Query 13956 G-AGATGTTAAATTGGACAAACGGTAAAACTCAGATTCCTCATGGTGCTCCATATTGGGG 14014 | ||| |||| | || || || | || |||| | | ||| || || |||||||| Sbjct 615 GTAGAACTTAACTGGGTTAAT-GGCAGAAGTCAGGTGGCACATAACGCACCTTATTGGGG 673 Query 14015 TGAATATCTTGATAAATTTACCTTTGCCTTTGATGGTGCTTTAGGTTGGAAATCAATTGT 14074 | || ||||| | ||| | || |||||||| || | || | || || Sbjct 674 ACAGTACCTTGACGTAGCTACTTACGCATTTGATGGGGCACTTTCTTACGACTCTATCAA 733 Query 14075 TGCTACTGTTTACGG-CTTGAAGGATGATGGTGTTACAACAGATTGGGATAAGAAAGGAA 14133 || | ||| | | ||| || | |||| ||||| |||||||| || |||| Sbjct 734 AGCCTCGGTTAAAGCACTTAAACCAA-ATGGC---ACAACGGATTGGGACAAAGAAGGCG 789 Query 14134 CTCAGTATGATGTTGATTGGGTGATTGCTTAT--ACTGGTCAGAAGATTGATTGGGATGG 14191 |||||||||||||||||| | || |||| || || | ||| | |||||||||| Sbjct 790 TACAGTATGATGTTGATTGGCTTAT--ATTATGGACAGGGGATAAGGTAAATTGGGATGG 847 Query 14192 TAATGTAATTTCTGAAGGGCATCCAGTCTCCGAGATTGGCACTGTTCAGTTGAAAAACAC 14251 | |||| | || | || ||| |||| | || ||||| || ||| | |||| Sbjct 848 TGATGTCCTGTCATCAAACCACACAGAGGCCGAAAAAGGTACTGTGCAATTGCAGGACAC 907 Query 14252 ATCTGTCAATGGTCAGCACAAAGCTAACTGGTGTAATCGTCAACCTGTAGAACATGGTGG 14311 |||| | ||| || ||| ||||| || ||| | |||||||| |||||||| Sbjct 908 TACTGTACAAGGTATTCATAAATTTAACTTTGCTACACGTAATCCTGTAGAGCATGGTGG 967 Query 14312 TTATCTTATGGGTCGTAACAAACCTTGGCATAACCGACCAATGAACGTTCCCGTTGAAGG 14371 ||| | || | | || | || | |||||| ||||| || || |||| | | | Sbjct 968 TTACATCATTGACAGAAATGAGCCATTCCATAACAGACCATTGCACACTCCCTTAGGTGA 1027 Query 14372 TACTTTG---AACTTTGGTAACGCATCAGATGCCGAACAGTGGTTCTTAGATGCTGCTTA 14428 | | || ||| | |||||||| | |||| ||| ||||||||||||||| ||| Sbjct 1028 GATTGTGAATAACATGGGTAACGCTGCTGATGGTGAAGTATGGTTCTTAGATGCTTGTTA 1087 Query 14429 TGTGATGTGGAA 14440 | |||||||| Sbjct 1088 CTTAATGTGGAA 1099 >seq509583 Length=340 Score = 122 bits (134), Expect = 4e-23 Identities = 138/182 (76%), Gaps = 5/182 (3%) Strand=Plus/Minus Query 8988 ACTGCTGGTTTCTCTGCTCTGGTTGCTGCC-AAAGATGCTGCTGACCCGGATACTGGTGC 9046 |||||||||||| || | | |||||| | |||| ||||||||| | ||||||||||| Sbjct 338 ACTGCTGGTTTCCGTGGTTTAGTTGCTACTTAAAGCTGCTGCTGATGCTGATACTGGTGC 279 Query 9047 TATCGTTCACTTTGAAACCGCTGCTGCTGCTCTGACTGAAGCAGAAATCTTCAAAG-TAA 9105 | | || ||| || || ||||| |||||||||||||| |||||| | | | Sbjct 278 TGTTGTCCACAAAGACAC---TGCTGGTGCTCTGACTGAAGAGTTAATCTTTGATTATGA 222 Query 9106 CCTACAACCTGTACCTGTCTGGCTCCGAAGCCAACATCATCATGTTCCACCCGAAACATG 9165 | |||||||||||| | ||||| || | || || ||||| ||||||||||| ||||||| Sbjct 221 CTTACAACCTGTACTTATCTGGTTCTAATGCTAATATCATTATGTTCCACCCTAAACATG 162 Query 9166 CT 9167 || Sbjct 161 CT 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243524679281824