Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019403.1 Length=43731 Score E Sequences producing significant alignments: (Bits) Value seq494738 138 3e-28 seq502596 113 1e-20 >seq494738 Length=508 Score = 138 bits (152), Expect = 3e-28 Identities = 187/258 (72%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 37140 GATAAGTCACCTTCTGTATCCTGTTACTCTATCGAAGCAGGTATGCAGGGTGCTCGTGCT 37199 || ||||| || || || | |||||||||||||| |||| ||||| ||||||||| Sbjct 94 GACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGCGCTCGTGCT 153 Query 37200 GATATTATTCTAGCAGATGACGTAGAATCGATGCAGAATGCTCGTACAGCAGCAGGTCGT 37259 ||||| || | |||||||| | || || | ||||| ||||| ||| || || ||| Sbjct 154 GATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTTGCTGGCCGT 213 Query 37260 GCCTTGCTTGAGGAATTA-ACTAAGGAATTTGAATCTATCAACCAGTTTGGTGATATTAT 37318 | | | |||| | | | || || || || ||||||||||| |||||| ||||||| Sbjct 214 GAATGG-TTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGGTCATATTAT 272 Query 37319 CTACCTTGGGACACCACAGAATGTAAACTCTATCTACAATAACTTGCCTGCCCGTGGATA 37378 ||| | || |||||||||| || | ||||||||||| ||||| ||||| || Sbjct 273 ATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAGTCGTGGCTA 332 Query 37379 CTCTGTTCGTATCTGGAC 37396 | |||||||||||||| Sbjct 333 CAAGGTTCGTATCTGGAC 350 >seq502596 Length=783 Score = 113 bits (124), Expect = 1e-20 Identities = 116/148 (78%), Gaps = 3/148 (2%) Strand=Plus/Plus Query 19634 TTATGACCTTACTT-GTATTGGCTTTGAAGAAGGCAAAGGTAAGTACAAAGGTAAGGTAG 19692 ||||||| |||||| ||||||||| ||| ||||||| |||||||| ||||| ||||||| Sbjct 344 TTATGAC-TTACTTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAG 402 Query 19693 CTAACCTCATTTTCAAATGGAAAGGAGGCAAGACAATCAAAGCTATGTTAGGTAAAGGGT 19752 |||| || | || || |||||||| ||| || |||||||||||| | || | || | Sbjct 403 CTAATCTGCTGTTTAAGTGGAAAGGTAACAAAACCATCAAAGCTATGCTTGG-CAGGGTT 461 Query 19753 GGACTCATGCAGATGCAGAACAGATGTT 19780 |||||||||| |||||| | |||| Sbjct 462 GGACTCATGCTATGGCAGAAGATTTGTT 489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138945091162332