Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019416.1
Length=38513
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 187 6e-43
>seq512931
Length=538
Score = 187 bits (206), Expect = 6e-43
Identities = 370/543 (68%), Gaps = 50/543 (9%)
Strand=Plus/Plus
Query 36378 CCTGACCACTCTCCGAGTGTGAAGTCCGTAGGTATCACTGGTCAGT-TGACTGGTAGCCG 36436
||||||||| || ||||||||||| ||| | ||||| | || |||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 36437 TGCCGACATCATCATTGCGGATGACGTTGAGATTCCGTCTAACAGTGCGACTATGGGTGC 36496
||| |||||| |||||||||||||||||||| | || ||| || || | ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 36497 CCGAGAGAAGCTGTGGACTCTGGTTCAGGAGTTCGCTGCGTTGCTTAAGCCCCTGCCGAC 36556
| || | || | ||||| |||| |||| |||| | || ||||| |||
Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GAC 183
Query 36557 TTCCCGAGTGATTTACCTTGGGACGCCTCAGACCGAAATGACCCTCTACAAGGAACTGGA 36616
||| | || ||| | || || || |||||||||||||||||||||| |||||| ||
Sbjct 184 GGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGA 242
Query 36617 AGATAACCGTGGCTACACCACCATCATCTGGCCTGCCCTGTACCCGAGGAGCCGTGAAGA 36676
|| ||| |||||| | || | ||||||||||| | ||||| || | ||| |
Sbjct 243 GGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGG-GATGTG--GC 296
Query 36677 AGACCT---GTACTACTCACA------------------ACGTCTCGCAC---CGATGCT 36712
||||| || ||||| || |||||| | | | |||||
Sbjct 297 TGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCT 356
Query 36713 CC--GAGC-GGAGTACGAAGAGAACCCTGAGGCCCTGTCCGGTACGCCTACCGACCCTGT 36769
| |||| ||| |||| ||||| | ||| | | | |||||| |||||| |
Sbjct 357 CAAGGAGCTGGAAGACGACGAGAAGC---------TGTTCTGGAAGCCTACAGACCCTAT 407
Query 36770 GCGATTCGATAGGGAAGACCTGAGGGAGCGTGAACTGGAATACGGTAAGGCTGGCTTTAC 36829
||||||||| ||||||||| | ||||| ||||| ||| || |||| |||||| |
Sbjct 408 TCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGC 467
Query 36830 GTTGCAGTTCATGCTCAACCCGAACCTGAGTGATTCCGAGAAGTACCCTCTGAGGCTCCG 36889
| ||||||||||||||||||||||| || || |||||||||||| ||| ||| ||
Sbjct 468 TCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCG 527
Query 36890 TGA 36892
|||
Sbjct 528 TGA 530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122351689800900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |