Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019485.1
Length=59080
Score E
Sequences producing significant alignments: (Bits) Value
seq523657 132 2e-26
seq184512 116 1e-21
seq505416 104 9e-18
seq505100 102 3e-17
seq400345 102 3e-17
seq514610 100 1e-16
seq491336 96.9 1e-15
seq512587 89.7 2e-13
seq505588 82.4 3e-11
>seq523657
Length=447
Score = 132 bits (146), Expect = 2e-26
Identities = 260/377 (69%), Gaps = 7/377 (2%)
Strand=Plus/Minus
Query 43463 GTATCAATCATACGTGAACCATAGATGTACTGTGTCTGCTGCGGAGTACGGTTATCTT-T 43521
|| |||||||||||||||||| | || || ||||| | ||||||||||||| | |
Sbjct 374 GTGTCAATCATACGTGAACCAGAAATAACCTTAGTCTGTTTAGGAGTACGGTTATTATCT 315
Query 43522 CAGT-ACCAGATACAGCTTCATCAGATCATCAAAAGAAACCAGAGATGGAGTAGCACCTT 43580
| | | ||||| | ||| | ||| || | | ||| | ||||||||||||||
Sbjct 314 AACTCAATAGATAAACG--CATTAAGTCACCATAGGTAACTACGCTTGGAGTAGCACCTT 257
Query 43581 CACCAGTTACTTCAGAGTCTTTAGTAGCAGCACCTGCATACATGACAACACCAGCACCAT 43640
||||||||||||| | ||||| ||||||||||| ||| | |||||||| || |
Sbjct 256 CACCAGTTACTTCTGCATCTTTGGTAGCAGCACCAGCAAAGTAAACAACACCGGCTGAGT 197
Query 43641 TCAGTAGATCAATTTGAAGCTGTGCTTCATACATCTGAGCAGCACCCTGAATTGCTTCAC 43700
| |||| ||||| || | ||||| ||| || ||||| | | |||||
Sbjct 196 TAAGTAAGTCAATCTGCAATGCCGCTTCTGTCATTTGGTTTGCACCACGTAACATTTCAC 137
Query 43701 GACGCATATGC-TGATGAAGTTCTGCATCAGAGTCAAAATCCATGGATTCACGGGAGAAT 43759
| || ||| | || || || | ||| | ||||| |||| || || | | | ||
Sbjct 136 GGTTAATGTGCATCATTAA-CTCAGAATCTGTATCAAAGTCCAAAGACTCTTGAGTGTAT 78
Query 43760 TCATAGAAGAAACCCATCTTATGCATGGAGCCTTCAATAACTTTACGGGTGAAACCAACA 43819
|||| ||||||||| | ||| | ||| || ||||||| || ||| ||||||| ||
Sbjct 77 TCATCGAAGAAACCGAACTTCTCCATTGAACCTTCAAGTTCTAAACGCTTGAAACCGACT 18
Query 43820 CGGTTAACACG-ACCAC 43835
||||||||||| |||||
Sbjct 17 CGGTTAACACGAACCAC 1
>seq184512
Length=2755
Score = 116 bits (128), Expect = 1e-21
Identities = 175/245 (71%), Gaps = 13/245 (5%)
Strand=Plus/Plus
Query 42989 TTAATAACTGCCAGACGCTCTGTACGCTCAGGCAGGAAACCATACCACCATTTAATAGAG 43048
||||||||||| | |||||||||||| | || || || ||||||||||| ||||||
Sbjct 107 TTAATAACTGCAATACGCTCTGTACGTAGACCCATAAAGCCGTACCACCATTTGATAGAG 166
Query 43049 CAGAAGCCCATTTCACCGTATGGGTCAGTACGGTCAGCAGTTTCCATACCCGGCAGTTTA 43108
| |||||||| || || || || || |||||||||||||||| |||| ||| |||
Sbjct 167 CTAAAGCCCATCTCGCCATAAGGATCGTTACGGTCAGCAGTTTCAGTACCTGGC---TTA 223
Query 43109 ---GAAATAATGCTAAAC---TTAGATTTCTCGCCAGAGTAGAAGAAACCAATAGTACTG 43162
| || | | |||| ||||| || || ||| | ||||||||||||| |
Sbjct 224 CGTGTAACAGTTTCAAACTTATTAGACTTACCGTCAGTTT---GGAAACCAATAGTAGTA 280
Query 43163 AAGGATTCGGCACCTACAACCAGCAGAGGATAAATATCATACTTGCTGTTAGTAGAATGC 43222
|| ||||| ||||||||| || || || | | ||| ||||| || || |||||
Sbjct 281 AATGATTCATCACCTACAATAAGAAGTGGGAATACATCGTACTTACTACCTGTTGAATG- 339
Query 43223 ATAGG 43227
|||||
Sbjct 340 ATAGG 344
Score = 105 bits (116), Expect = 3e-18
Identities = 218/320 (68%), Gaps = 7/320 (2%)
Strand=Plus/Plus
Query 43718 AGTTCTGCATCAGAGTCAAAATCCATGGATTCACGGGAGAATTCATAGAAGAAACCCATC 43777
|| || |||||||||||||| | ||| || || ||||| || | ||| | |
Sbjct 815 AGATCAGCATCAGAGTCAAAGTTCATTAGATCTTTAGACCATTCAGTAAACATACCAAAC 874
Query 43778 TTATGCATGGAGCCTTCAATAACTTTACGGGTGAAACCAACACGGTTAACACGACCACCG 43837
|| | | | |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 875 TTCTCAAACGTACCTTCAATCTCTTTACGTTTGAAACCAACACGGTTAACACGACCACCA 934
Query 43838 GTTTCAGACAGGGTAGGCAGTTTGCTTGAGATAGTACCTACGTCACGACTTGAACCATAG 43897
|||||| || ||| ||||| | || || ||| | ||| | ||| ||
Sbjct 935 GTTTCACCAAGTAAAGGAAGTTTACCTGGAATCAAACCAATGTCTTTAGAGCTACCGTAT 994
Query 43898 ATATTACCATTAGCGTACTGTGCGCCTTTAGCATCAATACCCTGATCGTTGACGTTCAGA 43957
| ||||||||| | | |||||| |||||||||||||||||||| | ||| |
Sbjct 995 AAGTTACCATTAACTAGTTCAGCGCCTGCTGCATCAATACCCTGATCGTTAATGTT---A 1051
Query 43958 TCGCTCA-GTA--AAGGCATATAGTGATAAGCCTTAATAGTCTTACCAAAATGCTTAGGC 44014
|| ||| || |||| | ||| || || |||||| |||| | | |||||||
Sbjct 1052 GCG-TCATCTAGCAAGGTAGATAATGGTACTGCTTAATTACTGTACCTGAGTTCTTAGGC 1110
Query 44015 ATGTTACGGACGTTAGCTAA 44034
||| |||| || | ||||||
Sbjct 1111 ATGGTACGTACATCAGCTAA 1130
>seq505416
Length=484
Score = 104 bits (114), Expect = 9e-18
Identities = 214/318 (67%), Gaps = 3/318 (1%)
Strand=Plus/Plus
Query 17855 TTTATTCCTGCATTCAAGGCTGCACCTAAAGCAGAAGATGGTTGGCATTATTTGTTTGGT 17914
||||||||| | || || ||||||||||| ||||| | |||||| | ||||||
Sbjct 158 TTTATTCCTACTTTTAAAAAAGCACCTAAAGCTCCTGATGGGTATCATTATCTATTTGGT 217
Query 17915 TTCTTCAATTTAGGGGGAACAGTATCAGGAAGACTTTCATCAAGTAATCCAAACTTACAG 17974
|||||| | || || || |||||||||||||| | |||||| || |||||
Sbjct 218 AACTTCAACCTTGGAGGTACTGTATCAGGAAGACTAAGTAGTAATAATCCTAATTTACAA 277
Query 17975 CAAATACCTTCAAGTAAATCTCCGTACTCAAAAGTAATCAAAAAATGTTTTAGAGCACCT 18034
||||| ||| ||| | | ||| | ||| | || || || |||||| ||| |||
Sbjct 278 CAAATTCCT---AGTGGTAGTACATACGCTAAACTTATTAAGAAGTGTTTTGTAGCCCCT 334
Query 18035 AAAGGTTTTCTATTTGTTGGGTTAGATTTTGCTTCATTAGAAGACAGAATATCTGCGGTT 18094
||||| | | ||||| || |||| || || | ||||| || || ||| ||
Sbjct 335 AAAGGATGGTTGTTTGTGGGTGCGGATTACGCATCTCTTGAAGATAGGATTGATGCTCTT 394
Query 18095 ACTACCAAAGATTCCAACAAATTGAAAGTGTATACCGATGGGTATGACGGGCACTGTTTA 18154
|| || ||| || || || ||||| || || || || ||||| || |||| |||
Sbjct 395 TTAACTAAGGATAGAAATAAGTTAAAAGTATACACAGACGGTTATGATGGACACTCATTA 454
Query 18155 CGTGCTTATGCGTACTTT 18172
|| || | || ||||||
Sbjct 455 CGAGCCTTTGGTTACTTT 472
>seq505100
Length=723
Score = 102 bits (112), Expect = 3e-17
Identities = 267/395 (68%), Gaps = 13/395 (3%)
Strand=Plus/Plus
Query 53805 AACCGGTCTTCCCATGCGCCTTTAAATTCTTTTTCCTCACAAGGGAATTTCTCACAAAGT 53864
|| ||||| ||||||||||||||||| ||| |||||||||||| || |||||||| | |
Sbjct 216 AAGCGGTCATCCCATGCGCCTTTAAACTCTGATTCCTCACAAGGAAACTTCTCACATACT 275
Query 53865 GGGTATACGTTAACTACCCATGCTCCGGATTCAACCGCTTCATATAAAATATC--TCGCT 53922
|| || || || |||| || || || |||| |||| ||||||| ||| | ||
Sbjct 276 GGATAAACACCTACATCCCAAGCACCAGACTCAATAGCTTGATATAAAGGATCGTTAGC- 334
Query 53923 TATTAAATGGAGTACCGTTGAATATAACCTTACGCTTAAGCGGACTTAATGC--AGGTAG 53980
|||||| |||||||| |||| |||| |||| || ||| || | ||
Sbjct 335 -ATTAAAGGGAGTACCAAGCCATATTCTCTTAGACTTAGTTGGGTGTAACGCATACTTAA 393
Query 53981 TACGCCTTTATACACAGTGTCATTGATGGTAGCCATAGATGCCTTAGAGTTAGCATCCTC 54040
|| ||| | | || || || || || | |||| | || | | ||| ||
Sbjct 394 TA-GCC-TGACCAACTGTATCCTTAATAGATTGAATAGCAGTAGGTGATCTTGAATCTTC 451
Query 54041 ATCACTTACCAGATCATCCAGTACTGCTAAT-ACAGGTCGTTTACCAAATATTTTGGAAC 54099
| ||| |||| ||||||| || | | ||| || || ||||| || ||| |||
Sbjct 452 GTTACTAACCAAGTCATCCATTA-TACCAATCTGCGGACGCATACCATATTCTTTAAAAC 510
Query 54100 CACGAATACCAGTCTTAGCACCAAA-CATCTTCAAGCCAAACTTATTACCTTCCTGATTC 54158
|||||| ||||| |||||||||||| | |||| | | ||| ||| |||| | ||||
Sbjct 511 CACGAACACCAGACTTAGCACCAAACCCTCTT-ACACAAAATTTACTACCATTGGTATTC 569
Query 54159 ACAAACTCAATATAGTTATCTGTAAAT-TTATATT 54192
| |||||| | ||||| |||||| | |||||
Sbjct 570 ATAAACTCCCAACGCTTATCAGTAAATCTCATATT 604
>seq400345
Length=893
Score = 102 bits (112), Expect = 3e-17
Identities = 194/284 (68%), Gaps = 4/284 (1%)
Strand=Plus/Minus
Query 43625 ACAACACCAGCACCATTCAGTAGATCAATTTG--AAGCTGTGCTTCATACATCTGAGCAG 43682
|||||||||||| | || || | ||||||||| |||| |||| || | | ||
Sbjct 352 ACAACACCAGCAGCGTTAAGCAAATCAATTTGCAAAGCAT--CTTCGGTGATTTCATTAG 295
Query 43683 CACCCTGAATTGCTTCACGACGCATATGCTGATGAAGTTCTGCATCAGAGTCAAAATCCA 43742
||||| || |||||| || ||| || | || ||||||| |||||| || |
Sbjct 294 CACCCATGATCATTTCACGGTTGATGTGCATTTGTAAATCAGCATCAGTGTCAAAGTCTA 235
Query 43743 TGGATTCACGGGAGAATTCATAGAAGAAACCCATCTTATGCATGGAGCCTTCAATAACTT 43802
|| || || | |||||| ||||||||| | || | | |||||||| | |
Sbjct 234 ACGACTCTTGGTTGTATTCATCGAAGAAACCAAATTTCTCTAATGAGCCTTCCAGTTCAA 175
Query 43803 TACGGGTGAAACCAACACGGTTAACACGACCACCGGTTTCAGACAGGGTAGGCAGTTTGC 43862
|||| ||||||||| |||||||||||||||||| ||||| || ||| || ||
Sbjct 174 TACGACGGAAACCAACGCGGTTAACACGACCACCGTTTTCACTTAGTACAGGTAGCTTAG 115
Query 43863 TTGAGATAGTACCTACGTCACGACTTGAACCATAGATATTACCA 43906
|| || ||||| ||||| ||||||||||| | ||||||
Sbjct 114 ACGAAATCGTACCAACGTCTTTGCTTGAACCATATAAGTTACCA 71
>seq514610
Length=413
Score = 100 bits (110), Expect = 1e-16
Identities = 162/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 17930 GGAACAGTATCAGGAAGACTTTCATCAAGTAATCCAAACTTACAGCAAATACCTTCAAGT 17989
|||||||||||||| ||||| || ||| || |||||||| | || || |||
Sbjct 3 GGAACAGTATCAGGTAGACTAAGTTCTAGTGGGCCTAACTTACAAAATATTCCCTCA--- 59
Query 17990 AAATCTCCGTACTCAAAAGTAATCAAAAAATGTTTTAGAGCACCTAAAGGTTTTCTATTT 18049
|| ||| || |||| |||||| ||||||||||| || | || | | ||
Sbjct 60 AATTCTGTCTATGCAAAGCACATCAAACGCTGTTTTAGAGCGCCAGATGGATGGTTCTTA 119
Query 18050 GTT-GGGTTAGATTTTGCTTCATTAGAAGACAGAATATCTGCGGTTACTACCAAAGATTC 18108
||| ||| | || || || || ||||| || ||||| ||||| | || ||||| || |
Sbjct 120 GTTGGGGCTGGACTTCGCCTCGTTAGAGGATAGAATCTCTGCACTAACAACCAAGGACCC 179
Query 18109 CAACAAATTGAAAGTGTATACCGATGGGTATGACGGGCACTGTTTACGTGC 18159
||| ||||| ||||| || || ||||| ||||| || || || ||||| ||
Sbjct 180 CAATAAATTAAAAGTTTACACAGATGGCTATGATGGCCATTGCTTACGAGC 230
>seq491336
Length=644
Score = 96.9 bits (106), Expect = 1e-15
Identities = 351/537 (65%), Gaps = 18/537 (3%)
Strand=Plus/Plus
Query 18212 ATTAATAGCATCGAAGGTAAATATAAAGATATACGTCAAAAAAGTAAAACTCCAACATTC 18271
|||||||| |||| | | | | ||||| | |||||| | |||||| | || ||||||
Sbjct 56 ATTAATAGTATCGCGGTTCGTTTTGAAGATGTTCGTCAAGACAGTAAACCACCTACATTC 115
Query 18272 TTACTTACCTACCGTGGTACATACATGGGTTTAATGCAGAAATGTGGTTTTGATGAACCA 18331
|| | ||||| | ||||| | ||| || ||||| | || ||||| | ||| | |
Sbjct 116 TTGTTGACCTATGGCGGTACGTTCATAGGACTAATGAATAA-TGTGGGTATGAGCAGAGA 174
Query 18332 AC-TGCAAAACAAATTGAATCCCGATATCACGAACTT-TATAAGGAATCTGATGATTGGG 18389
| ||| ||| ||| ||| || || || | ||| ||| | |||||||| ||||
Sbjct 175 AGATGCTAAAGAAACCGAAGCCAACTACCAT-AGCTTATATGTAGTTTCTGATGAGTGGG 233
Query 18390 TTAATGCCCGATTAGAAGAAGCTACTAAAGTTGGATACGTCACTGCTGCCTTTGGATTGC 18449
|||| | ||| | |||| | | || ||| | |||||||| ||||| || || |
Sbjct 234 TTAAATCTAAGATAGTACAAGCCAGCATAGATGGTTTCGTCACTGTCGCCTTCGGCTTAC 293
Query 18450 GCGTCAGAACGCCTCTGCTGCATCAGGTAGTAATG--GGA-ACCAAACATACACCTTATG 18506
| || |||| ||| ||||| | || | | ||| ||| | | | || ||| ||||
Sbjct 294 GTGTACGAACCCCTATGCTGTCTAAGACAATCATGACGGATAGCGGGCGTATACCATATG 353
Query 18507 AGGCAGAAGCTGAAGGGCGTACTGCTGGTAACGCATTAGGGCAA--TCATGGTGCTTACT 18564
| ||| | |||| | ||||| ||||||||| |||| ||| | |||| | ||
Sbjct 354 AAGCACAGAAAGAAGCTAGAACTGCGGGTAACGCACTAGGCCAAAGTTATGGAA--TGCT 411
Query 18565 TAATAACAGAGCAGCAGTTGATGTGGCTCAACGTCTGGAAAAATTAC--CTGAATTGCGT 18622
||||||||||| || || || | ||| | | || | || | |||| | ||
Sbjct 412 CAATAACAGAGCTGCTGTGGAATT---TCA--GGCAATAACACTTGCTTCTGATTACAGT 466
Query 18623 ATGCAGATCAGACCGGGTGCTCATATCCATGATGCTCAGTATTATATTATTCCGGATAAC 18682
| | || ||| |||| | |||||| ||||||||||| | |||| | | |
Sbjct 467 ACTGAAATATTACCTTGTGCCCCTATCCACGATGCTCAGTACTTCGTTATACGTAACGAT 526
Query 18683 ATTGATGTACTTCATTGGTTAAACGAAAACTTAGTTGATGCTGTTAAATGGCAGGAA 18739
||||| ||| || | ||||| || || ||| || || | | | | |||||||||
Sbjct 527 ATTGAAGTAGTTAAGTGGTTCAATGACAACCTAATTCCTTGTATGCAGTGGCAGGAA 583
>seq512587
Length=355
Score = 89.7 bits (98), Expect = 2e-13
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 18020 TGTTTTAGAGCACCTAAAGGTTTTCTATTTGTTGGGTTAGATTTTGCTTCATTAGAAGAC 18079
||||||| ||||||||||||| ||| | ||| ||| ||| | || ||||||||
Sbjct 160 TGTTTTAAGGCACCTAAAGGTTGGATATGGGCTGGCGCAGACTTTTCATCTTTAGAAGAT 219
Query 18080 AGAATATCTGCGGTTACTACCAAAGATTCCAACAAATTGAAAGTGTATACCGATGGGTAT 18139
||||| || || | || || ||| | || || | || ||||| |||||||| |||
Sbjct 220 AGAATTTCAGCTCTAACAACTCGTGATCCAAATAAGCTAAAGGTGTACACCGATGGTTAT 279
Query 18140 GACGGGCACTGTTTACGTGCTTATGCGTACTTTAAAGATGAAATGCCAGACATTATT 18196
|| || |||||| |||| || ||| | ||||| || |||||||| ||||||
Sbjct 280 GATGGTCACTGTCTACGAGCCTATTCTTACTTCGGGCATATGATGCCAGATATTATT 336
>seq505588
Length=551
Score = 82.4 bits (90), Expect = 3e-11
Identities = 75/92 (82%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 22421 GCTGTTAAGCAAATGCGACATAAAGTGCTTATGGCTGAGTGC-GGTGCAATTAACTTTGA 22479
||||| ||||| ||||| |||||| | ||||||||||| ||| ||||| ||||| | ||
Sbjct 91 GCTGTAAAGCAGATGCGTCATAAACTACTTATGGCTGA-TGCTGGTGCGGTTAACATGGA 33
Query 22480 AATGGATGAAATGGGTTCTAACTTAATGGGTA 22511
||| ||||| || ||||||||| || | ||||
Sbjct 32 AATCGATGAGATAGGTTCTAACCTACTTGGTA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187755385814808
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