Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019500.1
Length=168066
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 179 4e-40
seq509673 122 9e-23
>seq449735
Length=3187
Score = 179 bits (198), Expect = 4e-40
Identities = 348/511 (68%), Gaps = 7/511 (1%)
Strand=Plus/Plus
Query 94847 TTTCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTT 94906
||||| |||| || || |||||||| || | ||||| ||||| || || ||||| || |
Sbjct 29 TTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGCTCGT 88
Query 94907 GTGTGGTTATTGAAGCAGGCGACTCACTGAAATCTATTAACAAAACTGCTAACTCAATAA 94966
|||| | || || |||||| || | || |||||| || | ||||
Sbjct 89 GTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCAATTG 148
Query 94967 TTGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAG 95026
|| ||||| | || |||||||||| ||||| || |||| ||| |||||||| |
Sbjct 149 TTAAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGCACTGG 208
Query 95027 GTTCTCGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATT 95086
|| | ||| ||| ||||||| | ||||| ||| |||||| || | || || |
Sbjct 209 GTAGCCACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATAAGCACT 268
Query 95087 TCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTT 95146
| || || || |||||| ||||| ||||| || | ||||||||||| || || |||
Sbjct 269 TTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAAC--CTT 326
Query 95147 AT--TATCCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGG 95204
| || || |||||||||| ||||| ||||| ||| | || || ||||| ||| ||
Sbjct 327 GTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACCGCGG 386
Query 95205 TGTCGATGAGAACCGTATTCGCCATATGGACTACGGAATCCAGATGAACGACCTTATGAT 95264
|| ||||| ||||| | || ||| | || ||||| | ||| | || | || |||
Sbjct 387 GGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAATGTA 446
Query 95265 GGAACGTTTCGGTAAAAATGATTACATCACGTTGTTTAGTCCTCATGAAATGGGTGGTGA 95324
||||| |||| | || ||||| || |||||||| || ||| || ||
Sbjct 447 CTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATGTGCCAGG--- 503
Query 95325 GCTTTACTATTCTTATTTCGAAGACCAAGAC 95355
|||||| || | | ||| ||||||||||||
Sbjct 504 CCTTTACGATGCATTTTTTGAAGACCAAGAC 534
>seq509673
Length=441
Score = 122 bits (134), Expect = 9e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 95044 GGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAA 95103
||||||| ||||||| ||| ||| ||||||| |||| ||||| ||||||||||||
Sbjct 430 GGCGAAGCGCAGCATACGGGTTGTATCCCATTCTATAAACTGTTCCAAACTGCTGTTAAA 371
Query 95104 TCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCAT 95163
| || |||||||| || |||||||||| || || || | ||| || | ||||||
Sbjct 370 TGCTGCTCACAAGGCGGCGTCCGTGGCGGTGCAGCGACGTTGTTTTACCCATTATGGCAT 311
Query 95164 TTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGATGAGAACCGTATT 95223
|| |||||||| | | || |||||||| ||| || || || || |||||| |
Sbjct 310 TTAGAAGTTGAGTCATTATTGGTACTGAAAAATAACCGCGGCGTGGAAGACAACCGTGTC 251
Query 95224 CGCCATATGGACTACGG 95240
|| |||||||| |||||
Sbjct 250 CGTCATATGGATTACGG 234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534151280037920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |