Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq449735 179 4e-40 seq509673 122 9e-23 >seq449735 Length=3187 Score = 179 bits (198), Expect = 4e-40 Identities = 348/511 (68%), Gaps = 7/511 (1%) Strand=Plus/Plus Query 94847 TTTCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTT 94906 ||||| |||| || || |||||||| || | ||||| ||||| || || ||||| || | Sbjct 29 TTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGCTCGT 88 Query 94907 GTGTGGTTATTGAAGCAGGCGACTCACTGAAATCTATTAACAAAACTGCTAACTCAATAA 94966 |||| | || || |||||| || | || |||||| || | |||| Sbjct 89 GTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCAATTG 148 Query 94967 TTGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAG 95026 || ||||| | || |||||||||| ||||| || |||| ||| |||||||| | Sbjct 149 TTAAATACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGCACTGG 208 Query 95027 GTTCTCGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATT 95086 || | ||| ||| ||||||| | ||||| ||| |||||| || | || || | Sbjct 209 GTAGCCACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATAAGCACT 268 Query 95087 TCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTT 95146 | || || || |||||| ||||| ||||| || | ||||||||||| || || ||| Sbjct 269 TTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAAC--CTT 326 Query 95147 AT--TATCCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGG 95204 | || || |||||||||| ||||| ||||| ||| | || || ||||| ||| || Sbjct 327 GTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACCGCGG 386 Query 95205 TGTCGATGAGAACCGTATTCGCCATATGGACTACGGAATCCAGATGAACGACCTTATGAT 95264 || ||||| ||||| | || ||| | || ||||| | ||| | || | || ||| Sbjct 387 GGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAATGTA 446 Query 95265 GGAACGTTTCGGTAAAAATGATTACATCACGTTGTTTAGTCCTCATGAAATGGGTGGTGA 95324 ||||| |||| | || ||||| || |||||||| || ||| || || Sbjct 447 CTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATGTGCCAGG--- 503 Query 95325 GCTTTACTATTCTTATTTCGAAGACCAAGAC 95355 |||||| || | | ||| |||||||||||| Sbjct 504 CCTTTACGATGCATTTTTTGAAGACCAAGAC 534 >seq509673 Length=441 Score = 122 bits (134), Expect = 9e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 95044 GGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAA 95103 ||||||| ||||||| ||| ||| ||||||| |||| ||||| |||||||||||| Sbjct 430 GGCGAAGCGCAGCATACGGGTTGTATCCCATTCTATAAACTGTTCCAAACTGCTGTTAAA 371 Query 95104 TCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCAT 95163 | || |||||||| || |||||||||| || || || | ||| || | |||||| Sbjct 370 TGCTGCTCACAAGGCGGCGTCCGTGGCGGTGCAGCGACGTTGTTTTACCCATTATGGCAT 311 Query 95164 TTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGATGAGAACCGTATT 95223 || |||||||| | | || |||||||| ||| || || || || |||||| | Sbjct 310 TTAGAAGTTGAGTCATTATTGGTACTGAAAAATAACCGCGGCGTGGAAGACAACCGTGTC 251 Query 95224 CGCCATATGGACTACGG 95240 || |||||||| ||||| Sbjct 250 CGTCATATGGATTACGG 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534151280037920