Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019503.1
Length=166499
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 176 5e-39
seq506238 143 3e-29
seq509673 111 2e-19
seq351952 105 7e-18
seq487923 104 2e-17
seq326422 89.7 5e-13
seq443534 87.8 2e-12
>seq449735
Length=3187
Score = 176 bits (194), Expect = 5e-39
Identities = 402/595 (68%), Gaps = 19/595 (3%)
Strand=Plus/Minus
Query 138315 AACAGTTCACGGGCTTTAATGCGCTTTTTACGAAT--ATTAGGGTCTTTTTCTGCGGCTT 138372
||||||||| ||||||||||| ||||||||||| ||| | |||| ||| |
Sbjct 611 AACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTGATTCG--TCTTGTTCGTATTTTA 554
Query 138373 CGTATAATTCACGG-AAACG-GTCTTGGTCTTTAAAATAAGAATAATAAAGCTCGCCACC 138430
| |||| | || |||| ||||||||||| |||| | | || ||||| |||
Sbjct 553 C--ATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAG---GCCTGG 499
Query 138431 CATTTCATGCGGACTGAACAAAGTAATGTAATCATTCTTTCCGAATCGTTCCATCATTAG 138490
|| ||| || || ||||| |||||||| || | || || || ||||||
Sbjct 498 CACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAG 439
Query 138491 GTCATTCAGTTGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTT 138550
| ||| | || ||||| ||||| | |||||| | ||||| || || || || |||
Sbjct 438 TTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTT 379
Query 138551 ATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTA 138608
|||||| | || | || ||||| ||||| |||||||||| || || | ||| ||
Sbjct 378 ATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTT 321
Query 138609 GCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTC 138668
|| ||||||||||| | || || || ||||| |||||| || || ||||| || ||
Sbjct 320 GCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTA 261
Query 138669 CAAAAAGGAATAACACCAGTATG--ACGTACTTCACCTGTACCAATCTTAGAACCTTCGG 138726
||||||||||| ||| ||||| ||| |||| || | | ||| | ||| |
Sbjct 260 TAAAAAGGAATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTG 203
Query 138727 CACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTG 138786
||||||| ||| ||||||| ||||| || || |||| || | |||| ||||||||
Sbjct 202 CACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG 143
Query 138787 AAGCAGAAGCCTTATTGATAGACTTTAATGAATCACCTGCTTCAATAACAACGCATGAAC 138846
|| || | || || || | | || || || || | || || || |
Sbjct 142 CAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGC 83
Query 138847 TAAACTGCCGAGTTGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAGTGAAAT 138901
||||||| || ||||| ||||| ||| |||||||| || || || ||||||||
Sbjct 82 TAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
>seq506238
Length=275
Score = 143 bits (158), Expect = 3e-29
Identities = 142/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 60070 ATTACAAGCTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 60129
||||||| | || ||||| ||||| | | ||||| |||| ||||| || || | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 60130 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 60189
||||||| || ||||| ||||| |||||||| || || | || ||||||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 60190 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 60249
| ||||| |||||||||| ||||||||||| | || || ||||| | ||||||||||
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 60250 CTTC 60253
||||
Sbjct 218 CTTC 221
>seq509673
Length=441
Score = 111 bits (122), Expect = 2e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 138501 TGAACGCCATAATCCATATGACGGATACGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 138560
|| ||||| |||||||||||||||| |||||| ||||| || || |||||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 138561 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138620
|| | | |||||||| |||||||| | || ||| | || || || ||||||
Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347
Query 138621 CGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138680
|| | || || ||||| || ||||||||||||| || || |||| | || || |||
Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATA 407
Query 138681 ACACCAGTATG 138691
||| |||||
Sbjct 408 CAACCCGTATG 418
>seq351952
Length=416
Score = 105 bits (116), Expect = 7e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 60084 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 60143
||||||||||| | ||| || || ||| ||||| | ||| | |||||||| || |||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 60144 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 60203
|| ||||| |||||||| || || | || ||||| || || |||| | | ||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 60204 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 60256
| ||||||| || || |||||||| | ||||||||||||||||||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206
>seq487923
Length=1072
Score = 104 bits (114), Expect = 2e-17
Identities = 303/453 (67%), Gaps = 19/453 (4%)
Strand=Plus/Minus
Query 24113 ATACTAATTTATCTAGTACATATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 24172
||| |||||||| || |||| || |||||||| ||||||||| |||||||| ||
Sbjct 528 ATAGTAATTTATATA---CATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472
Query 24173 CGTCATTTGAACGCATGCTT-ACTAC-TGCATTGATTTTCTTATCACGAATCAGGTACT- 24229
||||| ||| ||| || || || | | ||| |||| ||||||||||| | ||||
Sbjct 471 CGTCACATGAGCGC-TGATTGACAATATAGATTAATTTA-TTATCACGAATAAA-TACTT 415
Query 24230 GTACTGTATTCGTACACATGAAATCTGACATACCATCTTTATTGTAGTCAAACTGCATGG 24289
| || |||| ||||| || ||||||||||| ||| |||| | ||| || || |
Sbjct 414 GAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAG 355
Query 24290 ATGGACGAGTATAAATCATGATACCACGCCGAGAATCAGGATTTTGACCAAGTTCAGCT- 24348
| || | |||||||||||| || | || | || || || | | || |||
Sbjct 354 AAGGTCTAGTATAAATCATAATTGCTTTACGTGTATTTTTATCTTTAAGTAATT--GCTC 297
Query 24349 AAACACATA-TCATACTGAGCATAGTTATCTTCTGACCAAATAGCCCAACCATAATTCGA 24407
| | || | |||| ||| || ||| | | ||||| |||||||||||| ||
Sbjct 296 ACGCGCAGACGCATATTGATAATTATTAGCAGCACTAAAAATACACCAACCATAATTTGA 237
Query 24408 GTTAATTTCGCCTTTAGAAGATGCTACCTGTTGCCAAATCTTCGG---TGTTTCACCTGG 24464
|||||||| |||| | || ||| | || ||||||||| || | | ||||
Sbjct 236 GTTAATTTTACCTTCTGTGCTTGATACATCTTCCCAAATCTTTGGAATAGGTGCACC--- 180
Query 24465 AATATCTTTAACAAACAGACTTTGAGACTTATACCATTCAAGTTCACGCTGAATGTATTC 24524
|||||||| ||||| || |||||| ||||||| | ||| | |||| |||||
Sbjct 179 CATATCTTTTACAAATAGTGATTGAGAACGATACCATAATAATTCTTTCCGAATATATTC 120
Query 24525 ATCATTAAGAGCGCCAAAAATAAAAGGTTCATC 24557
| |||| | | | |||||| || || |||
Sbjct 119 TTTATTAGGCTCACGTAAAATATAATCTTTATC 87
>seq326422
Length=2068
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/115 (79%), Gaps = 4/115 (3%)
Strand=Plus/Plus
Query 69598 GCGCTCTACCAAACTGAGCTACAC--GGAGTAAATTAAATTGGAGCGGATAATGAGAATC 69655
|||||||||||| |||||||| | | | | |||| |||||||| | | |||||
Sbjct 291 GCGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATC 349
Query 69656 GAACTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGC 69709
|||| | ||||||||| ||||||| ||||||||||| |||||||||||| ||||
Sbjct 350 GAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404
>seq443534
Length=806
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 137544 TCAATATTGGGCACGACTTGATTAAATGAACCTTCTTTAGATTCTTTAACACTTACTGGA 137603
||||| | ||||| ||||| || | ||| || || || |||| | | || ||
Sbjct 728 TCAATCTCAGGCACCACTTGCTTGAGGATACCGTCCTTTGACGCTTTGATAGACACCAGA 669
Query 137604 CCGCGTGGTGGCTCGATGCCGTTGGTAGAGTTAGATACCTGACTTGACGATTCACAAGGC 137663
|| |||||||||||||| |||||||| | ||| | | |||||| || | ||| | |||
Sbjct 668 CCACGTGGTGGCTCGATACCGTTGGTCGCGTTGGCGATCTGACTAGAGGTCTCAGACGGC 609
Query 137664 ATAAGGGCCGAGAGTGTACTGTTACGGATTCCATAAGTTCTGATTTCAGAACGGAGTGCT 137723
|| | ||| | || ||| ||| || | || | ||| ||||||||| ||| || | |
Sbjct 608 ATCAAGGCGGTTAGGGTAGAGTTGCGCAGACCGTGAGTGGTGATTTCAGTACGTAGGGTT 549
Query 137724 TCCCAATC 137731
||||||||
Sbjct 548 TCCCAATC 541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529169818503280
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