Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019504.1 Length=56621 Score E Sequences producing significant alignments: (Bits) Value seq520575 159 1e-34 seq513259 95.1 4e-15 >seq520575 Length=499 Score = 159 bits (176), Expect = 1e-34 Identities = 263/373 (71%), Gaps = 6/373 (2%) Strand=Plus/Plus Query 29879 TTCTGCCATAATGTAACCAGCCATAATATTATTACATCTTATGCTGAGGACGTTGT-GCT 29937 |||||||| |||| || ||| ||||| || || ||||||||||| |||||||| | | Sbjct 14 TTCTGCCACAATGCTTCCTCCCACAATATCATCACCTCTTATGCTGATGACGTTGTTGGT 73 Query 29938 GGAATCAAGCGGCTATGTGCGTACAGTCATGCTCGACCCATTGTTTCAACGTATATTCCC 29997 | || | ||||| | || || | ||| || |||||| || | || || Sbjct 74 GAAAGCTCT-GGCTACATCCGAACCATTATGACTAACGAGTTGTTTGGTCGGGTGTTTCC 132 Query 29998 TAATGTTCGTATAGACCCAAACAAACGTTCTCTTGAGCGTTGGGGTACTACGAAACAAGG 30057 | |||| || ||| | ||||| |||||||||||||||||| || ||| || Sbjct 133 TCATGTAAAGATTGACTCCTCGAAACGGAGTCTTGAGCGTTGGGGTACAACTAAAGGCGG 192 Query 30058 CGTAATGCACGCTGTTCCAACAGGCGGCAAGATGACTGGTAAAGGCGCTGGACTA-CTAG 30116 ||| | ||||| ||||| | ||||| ||| |||| ||||| || ||||| || || | Sbjct 193 CGTGCTTCACGCAGTTCCGTCTGGCGGTAAGTTGACAGGTAAGGGTGCTGG--TAGCTTG 250 Query 30117 -CAGAGAATTACTCTGGCTGCTTTGTGGTCGATGACGTTATCAAACCAAAGGATGCGTAT 30175 | || ||||||||| ||||| |||||||| ||||||| || |||||||| || Sbjct 251 TCTACTAAGTACTCTGGCGTACTTGTGCTCGATGACATTATCAAGCCCAAGGATGCATAC 310 Query 30176 TCCGACACGGTTCGTATGGAAATCAACGACCGTTATGATAACACATTTATGTCACGTCTT 30235 ||| | | ||||||| || || ||||| ||||| || ||||| | ||||| || ||| Sbjct 311 TCCAATGCTGTTCGTACCGAGATTAACGATCGTTACGACAACACCCTGATGTCGCGCCTT 370 Query 30236 GCGAATGACGGCG 30248 || || || |||| Sbjct 371 GCTAACGATGGCG 383 >seq513259 Length=585 Score = 95.1 bits (104), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 19736 TATACTCGTGGCGGCAAACTTGTTCGTTGGAAGATTAAACTCCTCAACAAGAAAGTGATG 19795 || || ||||||||||| ||||| || || | ||||| || ||||||||||| ||| Sbjct 364 TACACACGTGGCGGCAAGGTTGTTGCTTACAAAGTGAAACTGCTTAACAAGAAAGTTATG 423 Query 19796 TGGAGTGTTGGCGATACGCAGGAGAATGACCCATATAATTGG--GAAG-CTGCCAAAGCA 19852 ||| | | ||||| | | | ||| | || || ||| |||| | | ||||| Sbjct 424 TGGTGGATCGGCGAGAACGATGGTTGTGATCTGTACAACTGGATGAAGGCAGTTAAAGC- 482 Query 19853 ATTGGCGGCAAGACTCTGTATATCACAGAAGGTGAAGAAGATGCCATTGCGCTTCGTCAG 19912 ||| |||| ||| |||| ||||| |||||||||||||| |||||||| || || | Sbjct 483 --TGGTGGCATGACGTTGTACATCACCGAAGGTGAAGAAGACGCCATTGCACTGCGCTCG 540 Query 19913 ATTCTTCGTACTCTTAACCGTGGCACTGATTATGAAG 19949 || |||| || | | ||||| ||||| |||| || Sbjct 541 ATACTTCAAACAATGCAACGTGGTACTGACTATGCAG 577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179935689772692