Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019504.1
Length=56621
Score E
Sequences producing significant alignments: (Bits) Value
seq520575 159 1e-34
seq513259 95.1 4e-15
>seq520575
Length=499
Score = 159 bits (176), Expect = 1e-34
Identities = 263/373 (71%), Gaps = 6/373 (2%)
Strand=Plus/Plus
Query 29879 TTCTGCCATAATGTAACCAGCCATAATATTATTACATCTTATGCTGAGGACGTTGT-GCT 29937
|||||||| |||| || ||| ||||| || || ||||||||||| |||||||| | |
Sbjct 14 TTCTGCCACAATGCTTCCTCCCACAATATCATCACCTCTTATGCTGATGACGTTGTTGGT 73
Query 29938 GGAATCAAGCGGCTATGTGCGTACAGTCATGCTCGACCCATTGTTTCAACGTATATTCCC 29997
| || | ||||| | || || | ||| || |||||| || | || ||
Sbjct 74 GAAAGCTCT-GGCTACATCCGAACCATTATGACTAACGAGTTGTTTGGTCGGGTGTTTCC 132
Query 29998 TAATGTTCGTATAGACCCAAACAAACGTTCTCTTGAGCGTTGGGGTACTACGAAACAAGG 30057
| |||| || ||| | ||||| |||||||||||||||||| || ||| ||
Sbjct 133 TCATGTAAAGATTGACTCCTCGAAACGGAGTCTTGAGCGTTGGGGTACAACTAAAGGCGG 192
Query 30058 CGTAATGCACGCTGTTCCAACAGGCGGCAAGATGACTGGTAAAGGCGCTGGACTA-CTAG 30116
||| | ||||| ||||| | ||||| ||| |||| ||||| || ||||| || || |
Sbjct 193 CGTGCTTCACGCAGTTCCGTCTGGCGGTAAGTTGACAGGTAAGGGTGCTGG--TAGCTTG 250
Query 30117 -CAGAGAATTACTCTGGCTGCTTTGTGGTCGATGACGTTATCAAACCAAAGGATGCGTAT 30175
| || ||||||||| ||||| |||||||| ||||||| || |||||||| ||
Sbjct 251 TCTACTAAGTACTCTGGCGTACTTGTGCTCGATGACATTATCAAGCCCAAGGATGCATAC 310
Query 30176 TCCGACACGGTTCGTATGGAAATCAACGACCGTTATGATAACACATTTATGTCACGTCTT 30235
||| | | ||||||| || || ||||| ||||| || ||||| | ||||| || |||
Sbjct 311 TCCAATGCTGTTCGTACCGAGATTAACGATCGTTACGACAACACCCTGATGTCGCGCCTT 370
Query 30236 GCGAATGACGGCG 30248
|| || || ||||
Sbjct 371 GCTAACGATGGCG 383
>seq513259
Length=585
Score = 95.1 bits (104), Expect = 4e-15
Identities = 153/217 (71%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 19736 TATACTCGTGGCGGCAAACTTGTTCGTTGGAAGATTAAACTCCTCAACAAGAAAGTGATG 19795
|| || ||||||||||| ||||| || || | ||||| || ||||||||||| |||
Sbjct 364 TACACACGTGGCGGCAAGGTTGTTGCTTACAAAGTGAAACTGCTTAACAAGAAAGTTATG 423
Query 19796 TGGAGTGTTGGCGATACGCAGGAGAATGACCCATATAATTGG--GAAG-CTGCCAAAGCA 19852
||| | | ||||| | | | ||| | || || ||| |||| | | |||||
Sbjct 424 TGGTGGATCGGCGAGAACGATGGTTGTGATCTGTACAACTGGATGAAGGCAGTTAAAGC- 482
Query 19853 ATTGGCGGCAAGACTCTGTATATCACAGAAGGTGAAGAAGATGCCATTGCGCTTCGTCAG 19912
||| |||| ||| |||| ||||| |||||||||||||| |||||||| || || |
Sbjct 483 --TGGTGGCATGACGTTGTACATCACCGAAGGTGAAGAAGACGCCATTGCACTGCGCTCG 540
Query 19913 ATTCTTCGTACTCTTAACCGTGGCACTGATTATGAAG 19949
|| |||| || | | ||||| ||||| |||| ||
Sbjct 541 ATACTTCAAACAATGCAACGTGGTACTGACTATGCAG 577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 179935689772692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |