Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019514.1
Length=74669
Score E
Sequences producing significant alignments: (Bits) Value
seq184512 131 8e-26
seq516110 102 4e-17
seq514610 93.3 2e-14
seq400345 89.7 2e-13
seq515954 84.2 1e-11
>seq184512
Length=2755
Score = 131 bits (144), Expect = 8e-26
Identities = 708/1119 (63%), Gaps = 42/1119 (4%)
Strand=Plus/Plus
Query 54388 AACTGTTAAAGCGGAGCTACGGTTTTCACCAGAGCCAGACGCTCAGGGCGCAGAATCAGA 54447
|||| ||| ||| |||| | | || | | || | |||||| | || ||| || |
Sbjct 83 AACTATTATAGCTTAGCTGCACTCTTAATAACTGCAATACGCTCTGTACGTAGACCCATA 142
Query 54448 GTACCGTAGTACCACTTGATTGAGCTGAAGCCCATTTCGCCGTATGGGTCATTACGGTCG 54507
||||| |||| ||||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 143 AAGCCGTACCACCATTTGATAGAGCTAAAGCCCATCTCGCCATAAGGATCGTTACGGTCA 202
Query 54508 GCAGTTGCTTCGCCAGGCATCTTGGTAGTGACCTTGAACTTCAGGGTCTTACCGTCGGTC 54567
|||||| | || ||| | ||| | ||||| | ||||||||| ||
Sbjct 203 GCAGTTTCAGTACCTGGCTTACGTGTAACAGTTTCAAACTTATTAGACTTACCGTCAGTT 262
Query 54568 TGGAAGCCGATGGTGGTGAACGACTCAGCACCAACGCACAGCATTGGGTAGATGTCGTAC 54627
||||| || || || || || || ||| |||| || || | |||| | | ||||||
Sbjct 263 TGGAAACCAATAGTAGTAAATGATTCATCACCTACAATAAGAAGTGGGAATACATCGTAC 322
Query 54628 TTACCATTGGTCTCACGGTAACCAGGGT-TGGT-TCCCACAGTGGCGCCAGCGCCAGCCC 54685
|||| | || | | || | | || ||| | || ||||| | || | ||
Sbjct 323 TTACTACCTGTTGAATGATAGGCTGCGTCTGGAGTACCT-----GCGCCCACACCTGACC 377
Query 54686 AGTGCAGCATCTCTGGAACGACTACCAGACGGAACTGGTCAACAGTACCGATTTCGCCGT 54745
| | ||||| | || || || | | |||||||| ||| || ||| || || |
Sbjct 378 ACTTAAGCATATTAGGTACAACAATGAAACGGAACTCACCAATAGCACCACGCTCACCTT 437
Query 54746 TCAGGA---TAGTACCTGCATCTGCATACTGATGAACCGGTACGAAGGCAGCATTGCCAA 54802
| || | |||||||||| |||||| |||| ||| || | ||| ||| | |||
Sbjct 438 TAAGAAGAGTAGTACCTGC---TGCATATTGATTAACGGGAATGAATGCACGTTCACCAT 494
Query 54803 ACGGGTCAACCAGCTTACGAATCAGAG---GAATCAGCTCGGAGCCAATGTACAGAACAC 54859
||| || || | | |||| |||||| ||| || ||| |||| ||||
Sbjct 495 GTAAGTCTTTCA--TTGCTTCT-AGAGTATGAATCATCTCTGAACCACAATACACTACAC 551
Query 54860 GGCCGGCACTGATAGTGCGGGTGTCAATCATACGGCTACCGGTGATAACTTTGGTCTGCT 54919
| | ||| ||||| ||| ||||| |||| |||| || |||| ||||| || |
Sbjct 552 GACACGCAGGAATAGTCTTGGTATCAATATTACGAGTACCAGTAATAATCTTGGTTTGTT 611
Query 54920 TCGGAGTGCGGTTTTCGTCCAGCGTGATAGACAGACGCATCAGGTCGTCGTAATCAACAA 54979
| || || ||||| | ||| || | ||||| | |||||| ||||| ||| ||
Sbjct 612 TAGGTGTACGGTTATTGTCTAGAGAGATAGCTACACGCATAAGGTCTGAATAAGTAAGCT 671
Query 54980 CAGAAGGAGTAGCACCTTCGCCGGTGATTTCGCTGTCCTGAGTTGCAGCGCCGGTGTAAA 55039
|||| | ||| | | | | || | || || |||| || ||||||
Sbjct 672 CAGAGGTCTTAG-----TTACAGTAGCGTTAG------TG-GTAGCAGTACCAGTGTAAT 719
Query 55040 CGATGGTGCCAGCACCAGCCAACAGGTCTTTCTGCAGAACCGCTTCGGTCAACTGCACTG 55099
| ||||| || || || || || |||| || | |||| || | |||| |
Sbjct 720 ATACAGTGCCTGCGTGAGTTAATAGATCAATCTGTAGGGCATCTTCAGTTACTTGCATGG 779
Query 55100 CACCGTTCATCAGCTCGGTAGAGATGTGGCTGAACAGCTCAGAGTCAGAATCGAAGTCCA 55159
| || |||| ||||| |||||| || || |||| ||||| || |||| ||
Sbjct 780 CGCCAGTCATAAGCTCACGCATGATGTGTTCTAATAGATCAGCATCAGAGTCAAAGTTCA 839
Query 55160 GGCTTTCCTGAGAGAACTCAGTGAAGAAGCCGAACTTTTGAATGCGGCCAACACGAGAGA 55219
|| | ||| | ||||| || | || ||||| | || || ||
Sbjct 840 TTAGATCTTTAGACCATTCAGTAAACATACCAAACTTCTCAAACGTACCTTCAATCTCTT 899
Query 55220 TACGGCTGAAGCCAACACGGTTCACACGGCCACCGGTTTCAGTCAGCGTTGGGATTTTAC 55279
|||| |||| ||||||||||| ||||| ||||| |||||| || || | |||||
Sbjct 900 TACGTTTGAAACCAACACGGTTAACACGACCACCAGTTTCACCAAGTAAAGGAAGTTTAC 959
Query 55280 CAACGATGGTGCCGATGTCTTT---GCTTGAACCATACAGGTTCCCGTTAACGATGGTT- 55335
| || || |||||||| ||| ||| || | ||| || ||||| | |||
Sbjct 960 CTGGAATCAAACCAATGTCTTTAGAGCT---ACCGTATAAGTTACCATTAAC--TAGTTC 1014
Query 55336 -GCGCCTGCAGCATCGATACCCTGGTCGTTTACGTTACGGTCATCCAGCAGTGGGATGTA 55394
|||||||| ||||| |||||||| ||||| | |||| |||||| |||| || | ||
Sbjct 1015 AGCGCCTGCTGCATCAATACCCTGATCGTTAATGTTAGCGTCATCTAGCA-AGGTAGATA 1073
Query 55395 GTGGTAAACGCGGATTTCTTTGCCGTAGTTCTTAGGCATAGAAACAACGTCTGCCAGCGG 55454
||||| ||| || | || ||||||||||||| | | || || || | | |
Sbjct 1074 ATGGTACTGCTTAATTACTGTACCTGAGTTCTTAGGCATGGTACGTACATCAGCTAACTG 1133
Query 55455 CATAAAGTATTGGTCTTTACGCGCTTCAATGAGAGCTTT 55493
|||||| || || | ||| |||||||| | |||||
Sbjct 1134 ACCAAAGTACTGTTCATGACGGGCTTCAATTAACGCTTT 1172
>seq516110
Length=283
Score = 102 bits (112), Expect = 4e-17
Identities = 177/255 (69%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 55228 AAGCCAACACGGTTCACACGGCCACCGGTTTCAGTCAGCGTTGGGATTTTACCAACGATG 55287
|||||||||||||| ||||| ||||| ||||| | || | || || ||| || |||
Sbjct 255 AAGCCAACACGGTTAACACGACCACCTGTTTCTGATAGAGCAGGCATCTTAGCAGGGATA 196
Query 55288 GTGCCGATGTCTTTGCTTGAACCATACAGGTTCCCGTTAACGATGGTTGCGCCTGCAGCA 55347
| || || || || ||||| || || ||||| ||||| ||| | || || | |||
Sbjct 195 GAACCAATATCCTTACTTGAGCCGTATAGGTTACCGTTTACGGTTTCAGCACCAGTGGCA 136
Query 55348 TCGATACCCTGGTCGTTTACGTTACGGTCATCCAGCAGTGGGATGTAGTGGTAAACGCGG 55407
|| | ||||| ||||| | || ||||||| ||||| | ||||||| | |||
Sbjct 135 TCCAAGCCCTGATCGTTAATATTGGCATCATCCAATAGTGGTAGATAGTGGT-ATCGCTT 77
Query 55408 ATTTC-TTTGCCGTAGTTCTTAGGCATAGAAACAACGTCTGCCAGCGGCATAAAGTATTG 55466
| | | | || |||| ||||||||||| || || || ||| | |||||||||
Sbjct 76 AATACGAGTACCAGAGTTTTTAGGCATAGAGGTCACATCAGCTAGCTGACCAAAGTATTG 17
Query 55467 GTCTTTACGCGCTTC 55481
|||| ||| |||||
Sbjct 16 CTCTTCACGAGCTTC 2
>seq514610
Length=413
Score = 93.3 bits (102), Expect = 2e-14
Identities = 143/200 (72%), Gaps = 3/200 (2%)
Strand=Plus/Plus
Query 25972 TATGCCAAGGTCATCAAACAGATGTTTAAG-GCTCCGCCTGGATGGTTGTTTATCGGT-C 26029
||||| ||| |||||||| | ||||| || || || ||||||||| || | || |
Sbjct 69 TATGCAAAGCACATCAAAC-GCTGTTTTAGAGCGCCAGATGGATGGTTCTTAGTTGGGGC 127
Query 26030 TGGATTATTCCTCTCTGGAGGACAGAATCTCAGCCCTAACAACCAAAGACCCGAACAAGC 26089
|||| | |||| | ||||| |||||||| || ||||||||||| ||||| || ||
Sbjct 128 TGGACTTCGCCTCGTTAGAGGATAGAATCTCTGCACTAACAACCAAGGACCCCAATAAAT 187
Query 26090 TGAAGGTGTATACCGATGGCTATGACGGTCACTGCCTGCGGGCACATGCTTACTTCGGTG 26149
| || || || || ||||||||||| || || ||| | || ||| ||| || ||
Sbjct 188 TAAAAGTTTACACAGATGGCTATGATGGCCATTGCTTACGAGCATTCAGTTATTTTGGGC 247
Query 26150 AGCACATGCCGGACATCGAC 26169
| || ||||| || || |||
Sbjct 248 AACATATGCCTGATATTGAC 267
>seq400345
Length=893
Score = 89.7 bits (98), Expect = 2e-13
Identities = 265/405 (65%), Gaps = 8/405 (2%)
Strand=Plus/Minus
Query 54565 GTCTGGAAGCCGATGGTGGTGAACGACTCAGCACCAACGCACAGCATTGGGTAGATGTCG 54624
|||||||| || || || ||||||||| |||||| ||||||||| | | |||
Sbjct 826 GTCTGGAAACCAATTGTACTGAACGACTTCTCACCAATAACAAGCATTGGGAATACATCG 767
Query 54625 TACTTACCATTGGTCTCACGGTAACCAGGGTTGGTTCCCACAGTGGCGCCAGCGCCAGCC 54684
||||||||| || ||||||||||| ||| | |||| |||||||| ||||||
Sbjct 766 TACTTACCACCAGTTTCACGGTAACCTTCGTTAGCAGTAACAGCAGCGCCAGCACCAGCC 707
Query 54685 CAGTGCAGCATCTCTGGAACGACTACCAGACGGAACTGGTCAACAGTACCGATTTCGCCG 54744
|| |||| ||| || || || || | | ||| || ||||| || ||||| ||
Sbjct 706 CAATGCATCATTTCAGGTACAACGATGAACTTGAATTGATCAACTTGGCCAATTTCACCT 647
Query 54745 TTCAGGATAGTACCTGCATCTGCATACTGATGAACCGGTACGAAGGCAGCATTGCCAAAC 54804
| || |||||| || | || |||| | ||| | | || || || ||| |
Sbjct 646 GTAGCGACAGTACCACCAGCAGCGTACTTTTCAACAGAGATAAACGCTTTATCACCATGC 587
Query 54805 GGGTCAACCA---GCTTACGAATCAGAGGAATCAGCTCGGAGCCAATGTACAGAACACGG 54861
||| || |||| || || ||| || ||||| || || |||| | | |||
Sbjct 586 TCGTCTTTCATACGCTT---AACCATAGGGATAAGCTCTGAACCGATGTGGATATAACGA 530
Query 54862 CCGGCACTGATAGTGCGGGTGTCAATCATACGGCTACCGGTGA-TAACTTTGGTCTGCTT 54920
| || | | ||| || || |||| | ||||||||| |||| || | |||||
Sbjct 529 GCCGCGTTAACAGTCTTAGTATCCGTCATCTGCGTACCGGTGATTAACGTT-GAATGCTT 471
Query 54921 CGGAGTGCGGTTTTCGTCCAGCGTGATAGACAGACGCATCAGGTC 54965
||| |||||||| || ||| ||| |||||||| |||||
Sbjct 470 AGGACAACGGTTTTCATCAAGCTCAATACTTAGACGCATAAGGTC 426
>seq515954
Length=319
Score = 84.2 bits (92), Expect = 1e-11
Identities = 123/169 (73%), Gaps = 4/169 (2%)
Strand=Plus/Minus
Query 25962 CGGCAGCAAGTATGCCAAGGTCATCAAACAGATGTTTAAG-GCTCCGCCTGGATGGTTGT 26020
||||| | |||||| ||| || |||| | ||| ||| || |||||||| |||||||
Sbjct 166 CGGCACAACGTATGCTAAGCATATTAAAC-GTTGTATAAAAGCCCCGCCTGGTTGGTTGT 108
Query 26021 TTATCGGTCTGGATTATTCCTCTCTGGAGGACAGAATCTCAGCCCTAACAACCAAAGACC 26080
| ||| |||||| | | || | ||||||||||| || | || || | ||| |
Sbjct 107 GGGTAGGTGTGGATTTTGCTTCATTAGAGGACAGAATAAGTGCATTGACTACTAGAGATC 48
Query 26081 CGAACAAGCTGAAGGTGTATACCGATGGCTATGACGGTCACTGCCTGCG 26129
| | ||||| ||||||||||||||||| ||||| ||||||| || ||
Sbjct 47 CAGAAAAGCTAAAGGTGTATACCGATGG-TATGA-TGTCACTGTCTTCG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 237286489643860
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