Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019540.1 Length=49390 Score E Sequences producing significant alignments: (Bits) Value seq498376 82.4 2e-11 >seq498376 Length=1043 Score = 82.4 bits (90), Expect = 2e-11 Identities = 175/258 (68%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 12429 CCTACTGGAAACGTAACTGGGCTATTAACGCCATAGCAGAGGATTGTGAAGTTAAGAGAT 12488 ||||||||||||| |||||| || ||| || ||||| || || ||| |||||||| | Sbjct 410 CCTACTGGAAACGAAACTGGTCTCTTACAGCTATAGCTGATGAGTGTATAGTTAAGAACT 469 Query 12489 GCCTCAACACTAAATGGCTAAAGAATCCTGTCAGTGGCTTCTGGTACTCCCTGAGACATG 12548 | | || |||||| ||| ||||| || | |||| | | | ||| || Sbjct 470 CACGTGGAATGAAGTGGCTATGGAACCCTGTAGCTGAACTGTGGTTGTTCTTAAGAGCTG 529 Query 12549 AGAAAGATAGGTTCTCTACTCTCAACCAGGGTACAGGGGTGTATTGCTTTGACACTTGGA 12608 | ||||||||||||||||| | |||||| ||| || ||||||||||| | ||| Sbjct 530 ATAAAGATAGGTTCTCTACCTTAAACCAGTCTACTGGTACTTATTGCTTTGATAGATGGG 589 Query 12609 T-TAAGACCTTTAGAGCTAAG-AGGCCTCAGCTTTGCGGGCAGTTCCACGATGAAGTCAT 12666 | | || || | | | || ||||| || | |||||||| |||||||| || Sbjct 590 TATTCTAC--ATAATGAAACGTAGACCTCAACTAACTGCACAGTTCCATGATGAAGTTAT 647 Query 12667 ATTGGAGGTTAGGAGGGG 12684 || ||| ||| || ||| Sbjct 648 CTTAGAGCTTAAGAAGGG 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156940886161248