Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019540.1
Length=49390
Score E
Sequences producing significant alignments: (Bits) Value
seq498376 82.4 2e-11
>seq498376
Length=1043
Score = 82.4 bits (90), Expect = 2e-11
Identities = 175/258 (68%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 12429 CCTACTGGAAACGTAACTGGGCTATTAACGCCATAGCAGAGGATTGTGAAGTTAAGAGAT 12488
||||||||||||| |||||| || ||| || ||||| || || ||| |||||||| |
Sbjct 410 CCTACTGGAAACGAAACTGGTCTCTTACAGCTATAGCTGATGAGTGTATAGTTAAGAACT 469
Query 12489 GCCTCAACACTAAATGGCTAAAGAATCCTGTCAGTGGCTTCTGGTACTCCCTGAGACATG 12548
| | || |||||| ||| ||||| || | |||| | | | ||| ||
Sbjct 470 CACGTGGAATGAAGTGGCTATGGAACCCTGTAGCTGAACTGTGGTTGTTCTTAAGAGCTG 529
Query 12549 AGAAAGATAGGTTCTCTACTCTCAACCAGGGTACAGGGGTGTATTGCTTTGACACTTGGA 12608
| ||||||||||||||||| | |||||| ||| || ||||||||||| | |||
Sbjct 530 ATAAAGATAGGTTCTCTACCTTAAACCAGTCTACTGGTACTTATTGCTTTGATAGATGGG 589
Query 12609 T-TAAGACCTTTAGAGCTAAG-AGGCCTCAGCTTTGCGGGCAGTTCCACGATGAAGTCAT 12666
| | || || | | | || ||||| || | |||||||| |||||||| ||
Sbjct 590 TATTCTAC--ATAATGAAACGTAGACCTCAACTAACTGCACAGTTCCATGATGAAGTTAT 647
Query 12667 ATTGGAGGTTAGGAGGGG 12684
|| ||| ||| || |||
Sbjct 648 CTTAGAGCTTAAGAAGGG 665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156940886161248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |