Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019543.1 Length=160646 Score E Sequences producing significant alignments: (Bits) Value seq511525 93.3 4e-14 >seq511525 Length=313 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 56669 ATGAACGGACGCAACGACTGATTCTTTTTCATCAGCAGCGAAGAACAAA-TTGATTGATT 56727 |||||| || |||| ||| || | ||| |||||| | ||||| ||| || | ||| | Sbjct 305 ATGAACAGAAGCAATAACTTCCTCATCTTCGTCAGCATCAAAGAAAAAAGTTCAATGACT 246 Query 56728 GCGCTTGGTCAATGTGCCGTTGACGAGCTGAAGCAAGACGTATGATTGCATGTTGGTCAA 56787 || |||| ||| | |||||||||| | ||| | ||| || || || | || || | Sbjct 245 GCCCTTGACAAATATCTGGTTGACGAGCAGCAGCTAAACGAATAATCGCTCGCTGATCGA 186 Query 56788 TCTCATAAGCTGTTTTGAACACCA-TTTTCTCATGGTCTGTCAAAATATCCAGATGTTGA 56846 | ||| | ||||| ||||| || | ||||||| || ||||||| || | ||||||| Sbjct 185 TTTCAAATGCTGTCTTGAATACTAATTTTCTCGTGATCTGTCATCCATTCAATATGTTGA 126 Query 56847 ACAGAACC 56854 |||||||| Sbjct 125 ACAGAACC 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510563249031520