Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019909.1
Length=168809
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 176 5e-39
>seq449735
Length=3187
Score = 176 bits (194), Expect = 5e-39
Identities = 324/468 (69%), Gaps = 14/468 (3%)
Strand=Plus/Minus
Query 146509 GGACTGAACAACGTGATGTAATCGTTTTTAATCAATCGTTCAATCATGAGGTCGTTAATT 146568
|| || ||||| || ||||| |||| |||||| || || ||| || | ||||
Sbjct 488 GGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAAC 429
Query 146569 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 146628
|| || || ||||||| || || | ||||| |||||||| || || || || |||
Sbjct 428 TGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGT 369
Query 146629 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCACCGCCA 146688
|| | ||||||||||||||| | |||||||| ||| || |||| || ||||| ||||||
Sbjct 368 ACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCA 309
Query 146689 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAGCT---AAGTGAGTTTTCCAGAATGGA 146745
|| | |||||||| ||||| |||||| | | | ||||| || | || |||
Sbjct 308 CGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTG---CTTATAAAAAGGA 252
Query 146746 ATAACGCCTGTATG--ACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACGATACA 146803
||| || ||||| ||| |||| ||| || ||| | ||| ||||||
Sbjct 251 ATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGC 194
Query 146804 TTCCAGCATTAACACCAATACCGGCACGTTTGCTGATA--TATTTGATGATTGCTTTGTT 146861
|| || |||| ||||| |||||||| |||| |||| ||||| | |||||
Sbjct 193 GACCTGCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAATTGCAGACGA 136
Query 146862 TACTGCGTTAATACTGTCAAGACTATCGCCACCTTCAATAACAACGCAAGAACTGAACTG 146921
|||||||| ||||| || ||||||| || || | || || || || |||||
Sbjct 135 GGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTG 76
Query 146922 GCGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAAT 146969
||| || || ||||| ||||| ||||||||||| ||||| || |||||
Sbjct 75 GCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536513262118480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |