Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq449735 176 5e-39 >seq449735 Length=3187 Score = 176 bits (194), Expect = 5e-39 Identities = 324/468 (69%), Gaps = 14/468 (3%) Strand=Plus/Minus Query 146509 GGACTGAACAACGTGATGTAATCGTTTTTAATCAATCGTTCAATCATGAGGTCGTTAATT 146568 || || ||||| || ||||| |||| |||||| || || ||| || | |||| Sbjct 488 GGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAAC 429 Query 146569 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 146628 || || || ||||||| || || | ||||| |||||||| || || || || ||| Sbjct 428 TGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGT 369 Query 146629 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCACCGCCA 146688 || | ||||||||||||||| | |||||||| ||| || |||| || ||||| |||||| Sbjct 368 ACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCA 309 Query 146689 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAGCT---AAGTGAGTTTTCCAGAATGGA 146745 || | |||||||| ||||| |||||| | | | ||||| || | || ||| Sbjct 308 CGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTG---CTTATAAAAAGGA 252 Query 146746 ATAACGCCTGTATG--ACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACGATACA 146803 ||| || ||||| ||| |||| ||| || ||| | ||| |||||| Sbjct 251 ATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGC 194 Query 146804 TTCCAGCATTAACACCAATACCGGCACGTTTGCTGATA--TATTTGATGATTGCTTTGTT 146861 || || |||| ||||| |||||||| |||| |||| ||||| | ||||| Sbjct 193 GACCTGCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAATTGCAGACGA 136 Query 146862 TACTGCGTTAATACTGTCAAGACTATCGCCACCTTCAATAACAACGCAAGAACTGAACTG 146921 |||||||| ||||| || ||||||| || || | || || || || ||||| Sbjct 135 GGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTG 76 Query 146922 GCGAGTCGGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAAT 146969 ||| || || ||||| ||||| ||||||||||| ||||| || ||||| Sbjct 75 GCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536513262118480