Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019919.2
Length=122696
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 228 6e-55
seq507483 131 1e-25
seq466100 98.7 8e-16
seq508595 91.5 1e-13
>seq426744
Length=341
Score = 228 bits (252), Expect = 6e-55
Identities = 238/306 (78%), Gaps = 6/306 (2%)
Strand=Plus/Plus
Query 103121 TGCAGCGTAAGTACCGGAAACTACACCGTT--CTCGAAGTA-ACGCTGTAAGTTAACACG 103177
||| ||||| ||||| | ||| | ||| || || || | ||| |||| ||||| |||
Sbjct 36 TGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGTTAAGACG 95
Query 103178 CTGAGTTACGTAGTATGCATCACGCTGTTTACCAGCCTGACGTTCACGTTCTACAGTAAC 103237
||||||||||||||||||||||| || |||||||| ||||| ||||||||||| ||||
Sbjct 96 TTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTACTGTAAT 155
Query 103238 CGCACGCTGACGTGGCATTACGAAGTTGTCTTTGTAGACGATAACTGCGAATTCTGCAGA 103297
| ||| ||||| || | |||||||| || ||| |||||| |||||||| |
Sbjct 156 AGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATTCTGAACT 215
Query 103298 AGCAGCTTTAGCTGGGAAGTACTCGGAAACTACAACTGGCAGACCGTAGATACGACCAAC 103357
||||||||||||||||||| | ||||||| ||||| ||||||||||||||||||||
Sbjct 216 GACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGATACGACCAAC 275
Query 103358 CTGACCCTGCAG-TTTAAC-AG-CATCGTTACCAACCTGAGCAACGTCCTGCCATTCTTC 103414
|| || || || |||||| || ||| |||||| || ||| ||||||||||||||
Sbjct 276 TTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTGCCATTCTTC 335
Query 103415 ATCTTC 103420
||||||
Sbjct 336 ATCTTC 341
>seq507483
Length=1083
Score = 131 bits (144), Expect = 1e-25
Identities = 461/706 (65%), Gaps = 17/706 (2%)
Strand=Plus/Plus
Query 74021 ATTGATAAAGATGGGTGTATTCGTACAGGTTTCCATGAACACATGACTACCTCAGGGCGT 74080
||||| |||||| | | |||||||| || |||||| ||| || || || |||
Sbjct 372 ATTGACCGAGATGGTCATTTACGTACAGGGTTTAGCCAACACACGACCACTTCGGGTCGT 431
Query 74081 CTGAGTTCTTCTGGTAAACTGAACCTTCAACAGTTACCCCGTGACGAGTCTATTATCAAA 74140
|| ||||| || || ||||| ||| | || || | || ||||| || |||| | ||
Sbjct 432 CTAAGTTCATCAGGCAAACTTAACTTACAGCAACTTCCTCGTGATGATGCTATGGTTAAG 491
Query 74141 GGTTGTGTTGTCGCTCCAAAAGGTTATCGTGTAATTTCTTGGGACTTAACAACTGCGGAA 74200
|| ||| |||| ||||| || ||| | ||| | | ||| | ||||||||||
Sbjct 492 GGATGTATTGTAGCTCCTGCGGGCTATAGAGTAGTAGCCGTGGATATGGAAACTGCGGAA 551
Query 74201 GTTTACTATGCTGCTGTACTGTCCGGTGACAGAA-ACATGCAACAAGTATTT-ATCAACA 74258
| | || || | ||| || || | || || | || |||| ||| | | | |
Sbjct 552 ATGTGGGTAGCAGCAGCACTTAGTGGGGATAAAAGACCTACAGAAAGTGTTTTAACGATA 611
Query 74259 TGAAGAACGAACCTGATAAATACCCGGACTTCCACTCAAACATCGCGCACATGGTATTCA 74318
|| || | || | || | ||||||||| || || |||||||| ||||
Sbjct 612 TGGCTGACAAGTCTATTGTATCTGCCGACTTCCACAGCTCTATTGCACACATGGTGTTCA 671
Query 74319 AACTTACTTGTGAGCCTCGTGATGTTAAGAAGT-TGTTCCCAGCACTGCGTCAGGCAGCT 74377
| | | ||| | | ||| |||| | | ||||||| ||| | |||||||| ||
Sbjct 672 AGCCAAACTGTCTAGCGCATGAA-TTAAAAGCTATGTTCCCTGCATTACGTCAGGCTTCT 730
Query 74378 AAGGCAATTACCTTCGGTATTCTGTATGGTTCTGGTCCATCTAAAGTAGCACATTCTGTT 74437
|| || ||| | ||||||||||| | ||| ||| ||| |||| |||||| | ||| ||
Sbjct 731 AAAGCTATTTCATTCGGTATTCTATTCGGTAGTGGACCAGCTAAGGTAGCAGAATCTATT 790
Query 74438 AACGAAGCACTACTGGAACAGTCAGCTAAA-ACTGGTGAACCGTTCGTTGAATGTACCAC 74496
|| || | ||| | || || || |||| || ||| || | || || ||
Sbjct 791 AATGAGTCGCTATTTGAGCAA-CATGTAAAGACGGGTTGCCCTTACG---AACCTATTGA 846
Query 74497 TGCTGAT---GCTAAAGATTACATCGAAACGTACTTTACTCAGTTCCCACAGCTTAAGCG 74553
| || |||||||||||||| || ||||||| || ||||| | || || ||
Sbjct 847 TAAAGAAACAGCTAAAGATTACATTGATGTTTACTTTAGTCGTTTCCCTGACCTGAAACG 906
Query 74554 CTGGATTGATAAGTGCCACGATCAGATTAAGAACTTTGGATTCATCTATAGTCACTTTGG 74613
|||||||| || ||| || |||||| | ||| || || ||||| ||||| ||
Sbjct 907 TTGGATTGACGCGTCCCATGAGCAGATTCTACAGCATGGGTTTATTTATAGCCACTTCGG 966
Query 74614 TCGTAAACGTCGCCTTCATAACATCAACTCTGATGATCGTGGAGTACAG--GGTGAAGAA 74671
||||||||| | || | ||| ||| ||| | | | ||| || | ||||||||
Sbjct 967 ACGTAAACGTAGACTACGTAATATCCGCTCAGCGTCTAG-AGAG-ACTGTTGGTGAAGAG 1024
Query 74672 ATT-CGTTCTGGCTTTAACGCAATCATTCAGTCCGCATCTTCCGAT 74716
|| ||||| ||||| ||||| |||||||| ||||| || |||
Sbjct 1025 CTTACGTTCAGGCTTCAACGCTATCATTCAAGGGGCATCATCTGAT 1070
>seq466100
Length=556
Score = 98.7 bits (108), Expect = 8e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 103853 ATCTGGCTCAACCAGCATAGTAAGGATTTTGCTGGACATTGGTAGTTCATCGAACAGAGC 103912
||||||||||| || ||||||||| || || || | |||||| || || ||||| |
Sbjct 5 ATCTGGCTCAATCATCATAGTAAGAATCTTACTAGTCATTGGAAGCTCTTCGAATAAGTT 64
Query 103913 ACCAACAACCAGTTCTTTCTGCAGGTCACGGATTATACGAGTAGAGAATACAGTTTCGTA 103972
||| ||||||| | ||||||| ||||| | ||||| |||||| | ||| |||||
Sbjct 65 ACCTACAACCATTAACTTCTGCATATCACGTAGGATACGTTGAGAGAAAATAGTCTCGTA 124
Query 103973 CGCTTCACTAGACATCTGTACAGAAGAAGATCCGTTTACAGCTTTAGCGTGGGCTTTACC 104032
|||||||| | | | | ||| | |||| ||||||||| ||| |||| |||
Sbjct 125 GTTCTCACTAGAAACTTCGATACTTGAACTTGCGTTCACAGCTTTAAGGTGAGCTTCACC 184
Query 104033 GTGTTCAGTTTCGAAAACGTCTTTTTC 104059
| || ||||| || | |||||||
Sbjct 185 ATATTTGGTTTCAAACATTCCTTTTTC 211
>seq508595
Length=419
Score = 91.5 bits (100), Expect = 1e-13
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 30005 AGTTGGTGCGGGATACGAGAGTCGAACTCGTGTCTACTGGTTGGAAGCCAGTTATTCTAG 30064
|| |||||||| || |||| |||||||| |||||||| ||||||||||||||||||
Sbjct 357 AGCTGGTGCGGAATTAGAGATTCGAACTCTAATCTACTGGGTGGAAGCCAGTTATTCTA- 299
Query 30065 CCACTGAACTAATCACGCATAA 30086
||| |||||||||| |||||||
Sbjct 298 CCATTGAACTAATCCCGCATAA 277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 389988596546254
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |