Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_019919.2 Length=122696 Score E Sequences producing significant alignments: (Bits) Value seq426744 228 6e-55 seq507483 131 1e-25 seq466100 98.7 8e-16 seq508595 91.5 1e-13 >seq426744 Length=341 Score = 228 bits (252), Expect = 6e-55 Identities = 238/306 (78%), Gaps = 6/306 (2%) Strand=Plus/Plus Query 103121 TGCAGCGTAAGTACCGGAAACTACACCGTT--CTCGAAGTA-ACGCTGTAAGTTAACACG 103177 ||| ||||| ||||| | ||| | ||| || || || | ||| |||| ||||| ||| Sbjct 36 TGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGTTAAGACG 95 Query 103178 CTGAGTTACGTAGTATGCATCACGCTGTTTACCAGCCTGACGTTCACGTTCTACAGTAAC 103237 ||||||||||||||||||||||| || |||||||| ||||| ||||||||||| |||| Sbjct 96 TTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTACTGTAAT 155 Query 103238 CGCACGCTGACGTGGCATTACGAAGTTGTCTTTGTAGACGATAACTGCGAATTCTGCAGA 103297 | ||| ||||| || | |||||||| || ||| |||||| |||||||| | Sbjct 156 AGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATTCTGAACT 215 Query 103298 AGCAGCTTTAGCTGGGAAGTACTCGGAAACTACAACTGGCAGACCGTAGATACGACCAAC 103357 ||||||||||||||||||| | ||||||| ||||| |||||||||||||||||||| Sbjct 216 GACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGATACGACCAAC 275 Query 103358 CTGACCCTGCAG-TTTAAC-AG-CATCGTTACCAACCTGAGCAACGTCCTGCCATTCTTC 103414 || || || || |||||| || ||| |||||| || ||| |||||||||||||| Sbjct 276 TTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTGCCATTCTTC 335 Query 103415 ATCTTC 103420 |||||| Sbjct 336 ATCTTC 341 >seq507483 Length=1083 Score = 131 bits (144), Expect = 1e-25 Identities = 461/706 (65%), Gaps = 17/706 (2%) Strand=Plus/Plus Query 74021 ATTGATAAAGATGGGTGTATTCGTACAGGTTTCCATGAACACATGACTACCTCAGGGCGT 74080 ||||| |||||| | | |||||||| || |||||| ||| || || || ||| Sbjct 372 ATTGACCGAGATGGTCATTTACGTACAGGGTTTAGCCAACACACGACCACTTCGGGTCGT 431 Query 74081 CTGAGTTCTTCTGGTAAACTGAACCTTCAACAGTTACCCCGTGACGAGTCTATTATCAAA 74140 || ||||| || || ||||| ||| | || || | || ||||| || |||| | || Sbjct 432 CTAAGTTCATCAGGCAAACTTAACTTACAGCAACTTCCTCGTGATGATGCTATGGTTAAG 491 Query 74141 GGTTGTGTTGTCGCTCCAAAAGGTTATCGTGTAATTTCTTGGGACTTAACAACTGCGGAA 74200 || ||| |||| ||||| || ||| | ||| | | ||| | |||||||||| Sbjct 492 GGATGTATTGTAGCTCCTGCGGGCTATAGAGTAGTAGCCGTGGATATGGAAACTGCGGAA 551 Query 74201 GTTTACTATGCTGCTGTACTGTCCGGTGACAGAA-ACATGCAACAAGTATTT-ATCAACA 74258 | | || || | ||| || || | || || | || |||| ||| | | | | Sbjct 552 ATGTGGGTAGCAGCAGCACTTAGTGGGGATAAAAGACCTACAGAAAGTGTTTTAACGATA 611 Query 74259 TGAAGAACGAACCTGATAAATACCCGGACTTCCACTCAAACATCGCGCACATGGTATTCA 74318 || || | || | || | ||||||||| || || |||||||| |||| Sbjct 612 TGGCTGACAAGTCTATTGTATCTGCCGACTTCCACAGCTCTATTGCACACATGGTGTTCA 671 Query 74319 AACTTACTTGTGAGCCTCGTGATGTTAAGAAGT-TGTTCCCAGCACTGCGTCAGGCAGCT 74377 | | | ||| | | ||| |||| | | ||||||| ||| | |||||||| || Sbjct 672 AGCCAAACTGTCTAGCGCATGAA-TTAAAAGCTATGTTCCCTGCATTACGTCAGGCTTCT 730 Query 74378 AAGGCAATTACCTTCGGTATTCTGTATGGTTCTGGTCCATCTAAAGTAGCACATTCTGTT 74437 || || ||| | ||||||||||| | ||| ||| ||| |||| |||||| | ||| || Sbjct 731 AAAGCTATTTCATTCGGTATTCTATTCGGTAGTGGACCAGCTAAGGTAGCAGAATCTATT 790 Query 74438 AACGAAGCACTACTGGAACAGTCAGCTAAA-ACTGGTGAACCGTTCGTTGAATGTACCAC 74496 || || | ||| | || || || |||| || ||| || | || || || Sbjct 791 AATGAGTCGCTATTTGAGCAA-CATGTAAAGACGGGTTGCCCTTACG---AACCTATTGA 846 Query 74497 TGCTGAT---GCTAAAGATTACATCGAAACGTACTTTACTCAGTTCCCACAGCTTAAGCG 74553 | || |||||||||||||| || ||||||| || ||||| | || || || Sbjct 847 TAAAGAAACAGCTAAAGATTACATTGATGTTTACTTTAGTCGTTTCCCTGACCTGAAACG 906 Query 74554 CTGGATTGATAAGTGCCACGATCAGATTAAGAACTTTGGATTCATCTATAGTCACTTTGG 74613 |||||||| || ||| || |||||| | ||| || || ||||| ||||| || Sbjct 907 TTGGATTGACGCGTCCCATGAGCAGATTCTACAGCATGGGTTTATTTATAGCCACTTCGG 966 Query 74614 TCGTAAACGTCGCCTTCATAACATCAACTCTGATGATCGTGGAGTACAG--GGTGAAGAA 74671 ||||||||| | || | ||| ||| ||| | | | ||| || | |||||||| Sbjct 967 ACGTAAACGTAGACTACGTAATATCCGCTCAGCGTCTAG-AGAG-ACTGTTGGTGAAGAG 1024 Query 74672 ATT-CGTTCTGGCTTTAACGCAATCATTCAGTCCGCATCTTCCGAT 74716 || ||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 1025 CTTACGTTCAGGCTTCAACGCTATCATTCAAGGGGCATCATCTGAT 1070 >seq466100 Length=556 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 103853 ATCTGGCTCAACCAGCATAGTAAGGATTTTGCTGGACATTGGTAGTTCATCGAACAGAGC 103912 ||||||||||| || ||||||||| || || || | |||||| || || ||||| | Sbjct 5 ATCTGGCTCAATCATCATAGTAAGAATCTTACTAGTCATTGGAAGCTCTTCGAATAAGTT 64 Query 103913 ACCAACAACCAGTTCTTTCTGCAGGTCACGGATTATACGAGTAGAGAATACAGTTTCGTA 103972 ||| ||||||| | ||||||| ||||| | ||||| |||||| | ||| ||||| Sbjct 65 ACCTACAACCATTAACTTCTGCATATCACGTAGGATACGTTGAGAGAAAATAGTCTCGTA 124 Query 103973 CGCTTCACTAGACATCTGTACAGAAGAAGATCCGTTTACAGCTTTAGCGTGGGCTTTACC 104032 |||||||| | | | | ||| | |||| ||||||||| ||| |||| ||| Sbjct 125 GTTCTCACTAGAAACTTCGATACTTGAACTTGCGTTCACAGCTTTAAGGTGAGCTTCACC 184 Query 104033 GTGTTCAGTTTCGAAAACGTCTTTTTC 104059 | || ||||| || | ||||||| Sbjct 185 ATATTTGGTTTCAAACATTCCTTTTTC 211 >seq508595 Length=419 Score = 91.5 bits (100), Expect = 1e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 30005 AGTTGGTGCGGGATACGAGAGTCGAACTCGTGTCTACTGGTTGGAAGCCAGTTATTCTAG 30064 || |||||||| || |||| |||||||| |||||||| |||||||||||||||||| Sbjct 357 AGCTGGTGCGGAATTAGAGATTCGAACTCTAATCTACTGGGTGGAAGCCAGTTATTCTA- 299 Query 30065 CCACTGAACTAATCACGCATAA 30086 ||| |||||||||| ||||||| Sbjct 298 CCATTGAACTAATCCCGCATAA 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389988596546254