Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_019926.1
Length=45554
Score E
Sequences producing significant alignments: (Bits) Value
seq441498 93.3 1e-14
seq494738 89.7 1e-13
>seq441498
Length=539
Score = 93.3 bits (102), Expect = 1e-14
Identities = 108/143 (76%), Gaps = 6/143 (4%)
Strand=Plus/Plus
Query 39595 GGCCAGCCAACCTGCCCTGAGATGTA---CAATGATGAAGCACTGATTGAGAAGGAGATC 39651
|| ||||| ||||||||||| ||||| ||||||| | | ||| ||||||||| |
Sbjct 168 GGACAGCCTACCTGCCCTGAAATGTATACCAATGAT--ATC-TTGAATGAGAAGGAATTG 224
Query 39652 TCGCAGGGTACGGCTAAGTTCCAGCTTCAGTTTATGCTGAACACACGACTGTCTGACTCA 39711
| ||||||| ||||||||| ||| ||||||||||| || || |||| | || ||
Sbjct 225 GCACAGGGTAAAGCTAAGTTCATGCTACAGTTTATGCTTAATACTGGACTTGCAGATGCA 284
Query 39712 GAGAGATTCCCTCTTAAACTTAG 39734
|| |||||||| || ||||| ||
Sbjct 285 GACAGATTCCCACTCAAACTAAG 307
>seq494738
Length=508
Score = 89.7 bits (98), Expect = 1e-13
Identities = 184/269 (68%), Gaps = 6/269 (2%)
Strand=Plus/Plus
Query 39223 TCGCCATCCGTTGCCTGCTACTCTATTGAGG--GTAGTATGCAGGGTGCGCGTGCCGACC 39280
|| ||||||||| | || |||||||| ||| | || | ||||| || ||||| ||
Sbjct 100 TCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCA--CAGGGCGCTCGTGCTGATA 157
Query 39281 TTATCATTGCGGATGACGTCGAATCTCTTCAGAACTCAGCTACTGCCGCAGGTCGAGTTA 39340
| || ||||| ||||| | || || | |||||||| | | | || || || | |
Sbjct 158 TAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTTGCTGGCCGTGA-A 216
Query 39341 AGCTGGAAGAGGCA-ACCAAAGAGTTTGAGTCTATCAACCAAACAGGTGATATTCTCTAC 39399
| | || | ||| ||| |||||| ||||||||||||||| ||| ||||| | |||
Sbjct 217 TGGTTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGGTCATATTATATAC 276
Query 39400 CTGGGTACGCCTCAGTCAATTAACTCCATCTACAACAACCTACCGTCACGTGGCTACCAG 39459
| || || || ||| | | || ||||||||| || || ||||||||| ||
Sbjct 277 TTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAGTCGTGGCTACAAG 336
Query 39460 TTGAGAATCTGGCCAGGTCGATATCCCAC 39488
| | |||||| ||||| |||| || ||
Sbjct 337 GTTCGTATCTGGACAGGTAGATACCCTAC 365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144742287536784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |