Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq471823 107 2e-18 seq519617 105 6e-18 >seq471823 Length=369 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 39745 TGATCCTCAACAAAAAGCCAGTCTCGCACCTGGTCGCCTTTACCATACACCGGAATCTCT 39804 ||||| |||||| ||||||||||||| || || | ||| |||||||| | ||||| | Sbjct 226 TGATCATCAACATAAAGCCAGTCTCGAACTTGTTGGCCATTACCATAAATAGGAATTATT 167 Query 39805 TTATTCGTCAAGATACTTGTGATGATTTTTGGGATCAGCTTTTCTGGATGTTGATAAGGC 39864 ||| || | | | || ||| | ||||| || ||||| |||||||| || || Sbjct 166 TTACCCGCAAGGGCGCGGGTAATGGTGAGCGGGATAAGTTTTTCAGGATGTTGGTATGGG 107 Query 39865 CCAAAGTTATTGGAGCAGTTGGTTATCACAACAGGCAAATCGTAGGTGCGGTGCCAAGCT 39924 || | ||||| ||||| | | |||| | || ||| | ||||| || ||||||||| Sbjct 106 CCGTAATTATTTGAGCAATAACTGATCAAAGTTGGTAAACCATAGGTTCGATGCCAAGCT 47 Query 39925 TTCACAAGATGGTCAGATGCTGCCTTA 39951 ||||| || || ||| || ||||||| Sbjct 46 TTCACTAGGTGATCACTTGATGCCTTA 20 >seq519617 Length=476 Score = 105 bits (116), Expect = 6e-18 Identities = 78/87 (90%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 59837 GTGAGATTGGCAGAGTGGTCGATTGCGGGGGACTGTAAATCCCTTCTGAAAGGCGCGGTG 59896 ||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||| || Sbjct 453 GTGAGAT-GGCAGAGTGGTCGATTGCGAGGGACTGTAAATCCCTTCTTAACAGCGCGTTG 395 Query 59897 GTTCGAATCCATCATCTCAC-ACCAAA 59922 ||||||||||| | |||||| |||||| Sbjct 394 GTTCGAATCCAAC-TCTCACTACCAAA 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469525797244240