Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_020079.1
Length=147737
Score E
Sequences producing significant alignments: (Bits) Value
seq471823 107 2e-18
seq519617 105 6e-18
>seq471823
Length=369
Score = 107 bits (118), Expect = 2e-18
Identities = 148/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 39745 TGATCCTCAACAAAAAGCCAGTCTCGCACCTGGTCGCCTTTACCATACACCGGAATCTCT 39804
||||| |||||| ||||||||||||| || || | ||| |||||||| | ||||| |
Sbjct 226 TGATCATCAACATAAAGCCAGTCTCGAACTTGTTGGCCATTACCATAAATAGGAATTATT 167
Query 39805 TTATTCGTCAAGATACTTGTGATGATTTTTGGGATCAGCTTTTCTGGATGTTGATAAGGC 39864
||| || | | | || ||| | ||||| || ||||| |||||||| || ||
Sbjct 166 TTACCCGCAAGGGCGCGGGTAATGGTGAGCGGGATAAGTTTTTCAGGATGTTGGTATGGG 107
Query 39865 CCAAAGTTATTGGAGCAGTTGGTTATCACAACAGGCAAATCGTAGGTGCGGTGCCAAGCT 39924
|| | ||||| ||||| | | |||| | || ||| | ||||| || |||||||||
Sbjct 106 CCGTAATTATTTGAGCAATAACTGATCAAAGTTGGTAAACCATAGGTTCGATGCCAAGCT 47
Query 39925 TTCACAAGATGGTCAGATGCTGCCTTA 39951
||||| || || ||| || |||||||
Sbjct 46 TTCACTAGGTGATCACTTGATGCCTTA 20
>seq519617
Length=476
Score = 105 bits (116), Expect = 6e-18
Identities = 78/87 (90%), Gaps = 3/87 (3%)
Strand=Plus/Minus
Query 59837 GTGAGATTGGCAGAGTGGTCGATTGCGGGGGACTGTAAATCCCTTCTGAAAGGCGCGGTG 59896
||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||| ||
Sbjct 453 GTGAGAT-GGCAGAGTGGTCGATTGCGAGGGACTGTAAATCCCTTCTTAACAGCGCGTTG 395
Query 59897 GTTCGAATCCATCATCTCAC-ACCAAA 59922
||||||||||| | |||||| ||||||
Sbjct 394 GTTCGAATCCAAC-TCTCACTACCAAA 369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 469525797244240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |