Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_020201.1
Length=142349
Score E
Sequences producing significant alignments: (Bits) Value
seq353462 111 1e-19
seq511105 96.9 3e-15
seq449735 96.9 3e-15
>seq353462
Length=332
Score = 111 bits (122), Expect = 1e-19
Identities = 188/270 (70%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 76461 AACGCCCAAGTCTCTACCCATGTTTCCAGGGT-GGTGTCGGATACGATCGGCAGAAGAAC 76519
|||| ||| ||||| | |||||| || || || ||| |||| | |||| || ||
Sbjct 6 AACGTCCACGTCTCAATCCATGTCTCAAGCTCAGGAATCG-ATACCAATGGCAATAGCAC 64
Query 76520 TGCGTTCGGCCCACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTTGCTGAT 76579
|||| || | ||| || || | ||| || || || | || ||||| ||||| |||||
Sbjct 65 CACGTTTGGGCTACGACCTTGGATAGAGTCGAGTAGCGTTTGATACTTTAGGTTACTGAT 124
Query 76580 GAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTAGTCGATTCGGTCACGGGTCACGTT 76639
||||| |||| ||||| | || || || || || || ||||| | || |
Sbjct 125 AAAGATATGCTGTTCGTGTGAGGACAAATTGCCATAATCCATACGATCACGTGATACATC 184
Query 76640 AACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGAACTTCGC 76699
|||||||| || ||||| ||||||| ||||||||||||||||| | ||| || | |
Sbjct 185 GACTTCTTCTGGACGCCAAAAGAACGACAGTTGCTTTTCAATCAATTGCTCAAAGATAGG 244
Query 76700 ATGTTTCTGCTGGTCGTAGCGAGAAACGTT 76729
|| || || |||||||| || | |||||
Sbjct 245 GTGCTTTTGTTGGTCGTAACGCGCCACGTT 274
>seq511105
Length=248
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/200 (72%), Gaps = 11/200 (6%)
Strand=Plus/Plus
Query 75096 TCGTTACCGTTCTGCATTTCTTTCAGCATATACTGGGTGCCGGACAAATGCAAGGCTTCA 75155
|| |||||||| |||| || ||||||| ||| ||||||| ||||| | || |||
Sbjct 38 TCCTTACCGTTACGCATAAGATTGAGCATATGCTGCGTGCCGGTTAAATGTAGCGCCTCA 97
Query 75156 TCACGAGCAATCAGTTCGATAATGTTGGTGTTGCC---CAGCA-TTACCCCGCGCTCACC 75211
||||| ||||| || | |||||| |||| ||| || || || |||| ||||| |
Sbjct 98 TCACGCGCAATGAGCTTGATAATTTTGGCGTTACCTTCCATCAGTTAC-----GCTCAGC 152
Query 75212 GAAGGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGGATCGCTTCCAGTGCGTTGA-TGT 75270
||| || || ||||||||||| | || ||||| |||||||| | |||||| ||
Sbjct 153 GAACGCAAACGAGCAGGCAAATGAGGCATAAAAGCGAATCGCTTCTAAGACGTTGACTGC 212
Query 75271 TGTGAAGGCACAGGTACAGC 75290
| || |||||| ||||||
Sbjct 213 CAT-AATGCACAGATACAGC 231
>seq449735
Length=3187
Score = 96.9 bits (106), Expect = 3e-15
Identities = 194/286 (68%), Gaps = 4/286 (1%)
Strand=Plus/Minus
Query 74973 CCAATCATCGACCCGTCTTTGAACAGGAAGCTGCCCCAGTCTTTCTCCTGCACCGATGCG 75032
|||||||| || || |||||||| | | | | |||| ||||| || ||| | | |||
Sbjct 2661 CCAATCATTGAGCCATCTTTGAATAAGTACTCGGCCCATTCTTTTTCTTGCTCTGCAGCG 2602
Query 75033 TCGATAAATCCCTGTCGTGCTTCCTCGTGGCAATCTTCTGCCACACGGGCAAA--CAGGT 75090
|| | ||| | |||||| ||| |||| | | || ||| || | | ||
Sbjct 2601 TCCACAAACATTTTAATTGCTTCGTCGCGGCACTGCGCGGCAACAATCGCCATTTCTGG- 2543
Query 75091 CACCTTCGTTACCGTTCTGCATTTCTTTCAGCATATACTGGGTGCCGGACAAATGCAAGG 75150
| | || ||||||| ||||| || | |||| ||| ||||| || ||||| | |
Sbjct 2542 -ATCGTCTTTACCGTCTTGCATAATATTTAAAATATGCTGAGTGCCAGATAAATGTAGCG 2484
Query 75151 CTTCATCACGAGCAATCAGTTCGATAATGTTGGTGTTGCCCAGCATTACCCCGCGCTCAC 75210
||||||| || ||||| || | ||| || || | ||| || ||| | | ||||||
Sbjct 2483 CTTCATCGCGGGCAATAAGCTTGATTATTTTAGCGTTACCTTCCATCAATTCACGCTCAG 2424
Query 75211 CGAAGGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGGATCGCTTC 75256
| || || || |||||||||||||| || || || || ||||||||
Sbjct 2423 CAAACGCAAACGAGCAGGCAAAGCTGACATAAAAACGAATCGCTTC 2378
Score = 91.5 bits (100), Expect = 1e-13
Identities = 205/303 (68%), Gaps = 4/303 (1%)
Strand=Plus/Minus
Query 76455 TCACTGAACGCCCAAGTCTCTACCCATGTTTCCAGGG-TGGTGTCGGATACGATCGGCAG 76513
||||| |||||||| || |||| ||||||||| | |||| || |||| || || ||
Sbjct 2112 TCACTAAACGCCCACGTTTCTATCCATGTTTCTAACTCTGGTAGCG-ATACAATAGGTAG 2054
Query 76514 AAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTT 76573
|| | |||| || ||| || ||||| ||| || | | || || || | |||
Sbjct 2053 TAGGGCCACGTTTGGTGAACGCCCTTGTACGCTATCAAGCAATGTTTGATATTTTAAGTT 1994
Query 76574 GCTGATGAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTA-GTCGATTCGGTCACGGG 76632
|| | || || ||||| || ||||| || | | | || | ||| | ||||| |
Sbjct 1993 ACTTAAAAATATATGCTTTTCATGATCAGGTAA-TGCTTGAAAGTCTAAGCGGTCTTTGC 1935
Query 76633 TCACGTTAACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGA 76692
| |||| |||||||| || ||||| || |||| || ||||||||||| || || || |
Sbjct 1934 TTACGTCTACTTCTTCTGGGCGCCAAAAAAACGAAAGCTGCTTTTCAATTAGTTTTTCAA 1875
Query 76693 ACTTCGCATGTTTCTGCTGGTCGTAGCGAGAAACGTTCGGTGTCTCTCCGAGGAACATCG 76752
| | | | ||| || || || || ||||| ||||| || | |||| ||||| |
Sbjct 1874 AAATAGGGTATTTTTGTTGATCATAACGAGATACGTTAACGGTTTGGCCGAAAAACATTG 1815
Query 76753 GCT 76755
|||
Sbjct 1814 GCT 1812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452397453435280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |