Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq353462 111 1e-19 seq511105 96.9 3e-15 seq449735 96.9 3e-15 >seq353462 Length=332 Score = 111 bits (122), Expect = 1e-19 Identities = 188/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 76461 AACGCCCAAGTCTCTACCCATGTTTCCAGGGT-GGTGTCGGATACGATCGGCAGAAGAAC 76519 |||| ||| ||||| | |||||| || || || ||| |||| | |||| || || Sbjct 6 AACGTCCACGTCTCAATCCATGTCTCAAGCTCAGGAATCG-ATACCAATGGCAATAGCAC 64 Query 76520 TGCGTTCGGCCCACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTTGCTGAT 76579 |||| || | ||| || || | ||| || || || | || ||||| ||||| ||||| Sbjct 65 CACGTTTGGGCTACGACCTTGGATAGAGTCGAGTAGCGTTTGATACTTTAGGTTACTGAT 124 Query 76580 GAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTAGTCGATTCGGTCACGGGTCACGTT 76639 ||||| |||| ||||| | || || || || || || ||||| | || | Sbjct 125 AAAGATATGCTGTTCGTGTGAGGACAAATTGCCATAATCCATACGATCACGTGATACATC 184 Query 76640 AACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGAACTTCGC 76699 |||||||| || ||||| ||||||| ||||||||||||||||| | ||| || | | Sbjct 185 GACTTCTTCTGGACGCCAAAAGAACGACAGTTGCTTTTCAATCAATTGCTCAAAGATAGG 244 Query 76700 ATGTTTCTGCTGGTCGTAGCGAGAAACGTT 76729 || || || |||||||| || | ||||| Sbjct 245 GTGCTTTTGTTGGTCGTAACGCGCCACGTT 274 >seq511105 Length=248 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/200 (72%), Gaps = 11/200 (6%) Strand=Plus/Plus Query 75096 TCGTTACCGTTCTGCATTTCTTTCAGCATATACTGGGTGCCGGACAAATGCAAGGCTTCA 75155 || |||||||| |||| || ||||||| ||| ||||||| ||||| | || ||| Sbjct 38 TCCTTACCGTTACGCATAAGATTGAGCATATGCTGCGTGCCGGTTAAATGTAGCGCCTCA 97 Query 75156 TCACGAGCAATCAGTTCGATAATGTTGGTGTTGCC---CAGCA-TTACCCCGCGCTCACC 75211 ||||| ||||| || | |||||| |||| ||| || || || |||| ||||| | Sbjct 98 TCACGCGCAATGAGCTTGATAATTTTGGCGTTACCTTCCATCAGTTAC-----GCTCAGC 152 Query 75212 GAAGGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGGATCGCTTCCAGTGCGTTGA-TGT 75270 ||| || || ||||||||||| | || ||||| |||||||| | |||||| || Sbjct 153 GAACGCAAACGAGCAGGCAAATGAGGCATAAAAGCGAATCGCTTCTAAGACGTTGACTGC 212 Query 75271 TGTGAAGGCACAGGTACAGC 75290 | || |||||| |||||| Sbjct 213 CAT-AATGCACAGATACAGC 231 >seq449735 Length=3187 Score = 96.9 bits (106), Expect = 3e-15 Identities = 194/286 (68%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 74973 CCAATCATCGACCCGTCTTTGAACAGGAAGCTGCCCCAGTCTTTCTCCTGCACCGATGCG 75032 |||||||| || || |||||||| | | | | |||| ||||| || ||| | | ||| Sbjct 2661 CCAATCATTGAGCCATCTTTGAATAAGTACTCGGCCCATTCTTTTTCTTGCTCTGCAGCG 2602 Query 75033 TCGATAAATCCCTGTCGTGCTTCCTCGTGGCAATCTTCTGCCACACGGGCAAA--CAGGT 75090 || | ||| | |||||| ||| |||| | | || ||| || | | || Sbjct 2601 TCCACAAACATTTTAATTGCTTCGTCGCGGCACTGCGCGGCAACAATCGCCATTTCTGG- 2543 Query 75091 CACCTTCGTTACCGTTCTGCATTTCTTTCAGCATATACTGGGTGCCGGACAAATGCAAGG 75150 | | || ||||||| ||||| || | |||| ||| ||||| || ||||| | | Sbjct 2542 -ATCGTCTTTACCGTCTTGCATAATATTTAAAATATGCTGAGTGCCAGATAAATGTAGCG 2484 Query 75151 CTTCATCACGAGCAATCAGTTCGATAATGTTGGTGTTGCCCAGCATTACCCCGCGCTCAC 75210 ||||||| || ||||| || | ||| || || | ||| || ||| | | |||||| Sbjct 2483 CTTCATCGCGGGCAATAAGCTTGATTATTTTAGCGTTACCTTCCATCAATTCACGCTCAG 2424 Query 75211 CGAAGGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGGATCGCTTC 75256 | || || || |||||||||||||| || || || || |||||||| Sbjct 2423 CAAACGCAAACGAGCAGGCAAAGCTGACATAAAAACGAATCGCTTC 2378 Score = 91.5 bits (100), Expect = 1e-13 Identities = 205/303 (68%), Gaps = 4/303 (1%) Strand=Plus/Minus Query 76455 TCACTGAACGCCCAAGTCTCTACCCATGTTTCCAGGG-TGGTGTCGGATACGATCGGCAG 76513 ||||| |||||||| || |||| ||||||||| | |||| || |||| || || || Sbjct 2112 TCACTAAACGCCCACGTTTCTATCCATGTTTCTAACTCTGGTAGCG-ATACAATAGGTAG 2054 Query 76514 AAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTT 76573 || | |||| || ||| || ||||| ||| || | | || || || | ||| Sbjct 2053 TAGGGCCACGTTTGGTGAACGCCCTTGTACGCTATCAAGCAATGTTTGATATTTTAAGTT 1994 Query 76574 GCTGATGAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTA-GTCGATTCGGTCACGGG 76632 || | || || ||||| || ||||| || | | | || | ||| | ||||| | Sbjct 1993 ACTTAAAAATATATGCTTTTCATGATCAGGTAA-TGCTTGAAAGTCTAAGCGGTCTTTGC 1935 Query 76633 TCACGTTAACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGA 76692 | |||| |||||||| || ||||| || |||| || ||||||||||| || || || | Sbjct 1934 TTACGTCTACTTCTTCTGGGCGCCAAAAAAACGAAAGCTGCTTTTCAATTAGTTTTTCAA 1875 Query 76693 ACTTCGCATGTTTCTGCTGGTCGTAGCGAGAAACGTTCGGTGTCTCTCCGAGGAACATCG 76752 | | | | ||| || || || || ||||| ||||| || | |||| ||||| | Sbjct 1874 AAATAGGGTATTTTTGTTGATCATAACGAGATACGTTAACGGTTTGGCCGAAAAACATTG 1815 Query 76753 GCT 76755 ||| Sbjct 1814 GCT 1812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452397453435280