Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_020416.1
Length=160221
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 178 1e-39
>seq449735
Length=3187
Score = 178 bits (196), Expect = 1e-39
Identities = 283/399 (71%), Gaps = 8/399 (2%)
Strand=Plus/Minus
Query 133805 CCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAATACCAAC 133864
|||||||||| |||||| | |||||| ||||| || || ||| || || | ||| |||
Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363
Query 133865 AGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGTACA 133924
|||||||| || || | |||||| | || || | | || ||||| || |||||||||
Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303
Query 133925 CCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATTACGCCA 133984
|||||||| ||||| ||| || || || ||||| || || | |||||||| ||
Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243
Query 133985 GTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTG 134044
||||| | |||||||||| | ||| | || || ||||| ||| |||||
Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183
Query 134045 ATGCCGATACCAGCTCGCTTGCTGATA--TACTTAATAATACTG-TTAC-TTGCCGCATT 134100
||||| || || || || |||| |||| || |||| ||| || || | || ||
Sbjct 182 ATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAAT--TGCAGACGAGGTGGCGTT 127
Query 134101 AATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTAGG 134160
||| |||| || |||||| || || | |||||| || |||||||| || || ||
Sbjct 126 AATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGG 67
Query 134161 AGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAAT 134199
|||||| | ||||||||||| || ||||| | ||||||
Sbjct 66 CGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 509212182565520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |