Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq449735 178 1e-39 >seq449735 Length=3187 Score = 178 bits (196), Expect = 1e-39 Identities = 283/399 (71%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 133805 CCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAATACCAAC 133864 |||||||||| |||||| | |||||| ||||| || || ||| || || | ||| ||| Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363 Query 133865 AGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGTACA 133924 |||||||| || || | |||||| | || || | | || ||||| || ||||||||| Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303 Query 133925 CCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATTACGCCA 133984 |||||||| ||||| ||| || || || ||||| || || | |||||||| || Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243 Query 133985 GTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTG 134044 ||||| | |||||||||| | ||| | || || ||||| ||| ||||| Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183 Query 134045 ATGCCGATACCAGCTCGCTTGCTGATA--TACTTAATAATACTG-TTAC-TTGCCGCATT 134100 ||||| || || || || |||| |||| || |||| ||| || || | || || Sbjct 182 ATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAAT--TGCAGACGAGGTGGCGTT 127 Query 134101 AATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTAGG 134160 ||| |||| || |||||| || || | |||||| || |||||||| || || || Sbjct 126 AATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGG 67 Query 134161 AGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAAT 134199 |||||| | ||||||||||| || ||||| | |||||| Sbjct 66 CGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509212182565520