Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq20438 131 2e-25 >seq20438 Length=3122 Score = 131 bits (144), Expect = 2e-25 Identities = 437/662 (66%), Gaps = 21/662 (3%) Strand=Plus/Plus Query 160308 CCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTG 160367 ||||| || |||||| | |||||| |||||||||| ||| ||||| ||||| || ||| Sbjct 789 CCGGGTACAGAGGGCATCCTCTGTAGAGTGGCCCACAAGTGCTCGTCAGGGCTATATGTG 848 Query 160368 TCCTTAGACCATTCCATGAACTCTCCGATTAACC-TGTCCCGCAGAACGTGAGTAACGTA 160426 ||||| ||||| |||| || | || || | ||||| ||| ||||| || || | Sbjct 849 TCCTTCGACCACTCCAGGAGTT-TCTGAGCCTCTGTGTCCTGCATCACGTGTGTCACAAA 907 Query 160427 GGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGT 160486 | ||| | || |||||||| || | || | ||| ||||| || || ||||| | Sbjct 908 GTCTCTTGAGACCACAAAGTAGGCATTTCCTGTGAACATCGGGCTGCTAATCGGCGGGG- 966 Query 160487 GTCTTTGTC-CTGACCGGTGTTAGACACCACTC-CTTTCACCAGCGCGTGTCGCTTCTTC 160544 | |||| | || | | || | || |||| | |||| | || | | || | Sbjct 967 GACTTTTCCTCTCATCTGTCCT-GATGACACTGTCCGTCACAAT---GTAATGATACTGC 1022 Query 160545 CACCTGACCATCTTGTG--CGGTGGCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGA 160602 || | | | |||||| || ||| | || ||||| | |||||| || | | Sbjct 1023 CAACGGGCTTTCTTGTATTCGCCGGCCGCC--TCAGTCTCCATACTGTTTTTTCCATTTA 1080 Query 160603 GCGAT-TTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCAC 160661 | ||| || || || || |||||| || || || | || |||||||| || || Sbjct 1081 G-GATCTTGAGTATTTTAACCATCTCTCCATTGGTTTTTATAGGGAAGTCGGTCCCACAG 1139 Query 160662 AAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTG--CAGGTCCCTCATGCAATTAA 160719 ||| | || |||| |||| || || || | | ||| || ||||||| || | Sbjct 1140 GTGTTGAGCAGGTACCTCCACTTTACGGG--GGACTTCAACAGATCTGTCATGCAGTTCA 1197 Query 160720 TATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAA 160779 ||| |||||||| ||| |||||| || || | || || |||||||| | || | || Sbjct 1198 GATCCGCCTGCACACGGGACCAGGAGGCATAAATCACCTTTTCTAGTTTTGTAGCTATAA 1257 Query 160780 AGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGC-C 160838 | || || |||||| | || || || |||| ||| ||| |||| | | Sbjct 1258 ACACATTGGGGAAACAGGCAACAATAGCCTCCACAGCCTTCT-GAAATTCTTCGGAGGAC 1316 Query 160839 TTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTC 160898 ||| ||||||||||||| || || | ||| ||||| | || | || | || | | | Sbjct 1317 TTTTGGTCCACGTGCACACAGTAGATGTTTTGAGGTGTATAAACTGCTCGAAGAAGTCGC 1376 Query 160899 TCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCC 160958 || ||||| || || || | ||||||||| || |||||||| || ||||| || ||||| Sbjct 1377 TCAAACATTTCAATTTTCTCATGGATCACAATGGAGTAGGCAATGGGAAAGTCATTCTCC 1436 Query 160959 TC 160960 || Sbjct 1437 TC 1438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573427576949520