Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020484.1 Length=147284 Score E Sequences producing significant alignments: (Bits) Value seq509954 183 3e-41 seq518761 91.5 1e-13 >seq509954 Length=433 Score = 183 bits (202), Expect = 3e-41 Identities = 301/433 (70%), Gaps = 1/433 (0%) Strand=Plus/Plus Query 74781 TTGCACAAGACCTTAAAGCAATTCACGGCTTAGACGCTGAAACTGAATTAGCTAACATTC 74840 |||| || || | ||||| | || ||||| ||||| ||| ||| | || || |||| Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60 Query 74841 TTTCTGCTGAGATCCTTGCTGAAATCAATAGAGAAGTTGTGAGAACAATTTACGAAAAAG 74900 |||| |||| || ||||| ||||| || | || | | | || | || | || | Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120 Query 74901 CTAAAAAAGGTGCTAACACTAATACAACTACATCTGGTACTTTTGATTTAGATACGGACT 74960 | ||| ||||| | ||| | || | | |||||| || |||||||| || Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180 Query 74961 CTAACGGTAGATGGTCTGTTGAAAAATTCAAAGGACTAATGTTCCAAGTTGAAAGAGACG 75020 | || ||| | ||||| || ||||||||||||||||| ||||||||| ||||| | || | Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240 Query 75021 CTAACGTAATTGCACAAGAAACAAGAAGAGGAAAAGGAAATATCCTTATTTGTTCTTCTG 75080 ||||| ||| || ||||||| ||| | || ||||| || | |||| ||||| |||| Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300 Query 75081 ATGTTGCTTCTGCTTTACAAATGGCGGGTATCTTAGATTACGCTCCTGCGTTAAACAACA 75140 | || |||||||| || || || ||| | |||| ||| ||||| | | Sbjct 301 ACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCTATCTCTGCAA 360 Query 75141 GTTTA-AATGTTGATGACACAGGTAATACTTTTGCTGGTACTCTAAACGGTAGATACAAA 75199 | || || || ||||| || |||||||| ||||||||| |||||||||| | | |||| Sbjct 361 ATCTACAAAGTAGATGATACCGGTAATACATTTGCTGGTGTTCTAAACGGTCGTTTCAAA 420 Query 75200 GTGTACATTGACC 75212 || | |||||||| Sbjct 421 GTATTCATTGACC 433 >seq518761 Length=591 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 94140 tttAAACAGATAGTAAAACAAGGAGAAATACCTAACTTATTATTATCTGGTACAGCAGGT 94199 |||||| || |||||| | || ||| | ||||| | ||||||||||| |||| || Sbjct 340 TTTAAAGGCATGGTAAAAAATGGTGAATTTCCTAATATGTTATTATCTGGGCCAGCCGGA 399 Query 94200 ACAGGTAAAACTACAATTGCGAAAGCATTATGTAATGAACTTGATTGTGATGTAATGATG 94259 ||||||||||||||| ||| ||||||||| |||||||||| ||| || | | Sbjct 400 ACAGGTAAAACTACAGCTGCACGAGCATTATGCCGAGAACTTGATTATGAACTATTAGTA 459 Query 94260 ATTAATGGTTCAGACGAAGGTCG 94282 |||||||| || || |||| || Sbjct 460 ATTAATGGATCTAACCAAGGACG 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468085719340480