Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 156 5e-33
seq489705 87.8 2e-12
>seq509954
Length=433
Score = 156 bits (172), Expect = 5e-33
Identities = 252/359 (70%), Gaps = 4/359 (1%)
Strand=Plus/Plus
Query 107862 TTGCTCAGGACCTGAAGGCGATTCATGGTTTGGATGCCGAGCAAGAGCTCGCTAACATCC 107921
|||||||||| |||| || | ||||| ||||| || || |||| || || || || |
Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60
Query 107922 TCAGCACTGAAATCCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCATCTACACCAACG 107981
| |||||||| ||||| ||||| |||||||| | |||||||| | || | | |
Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120
Query 107982 CTGTTGCAGGTGCTCAGAACAACACTGCTGCTCCTGGTATCTTCGACCTCGACGTTGACT 108041
| | ||||| || | | || ||||||||||||| | ||||| ||
Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180
Query 108042 CCAATGGTCGCTGGTCTGTTGAGAAGTTCAAAGGTCTGCTGTTCCAAATCGAGCGCGATG 108101
| |||||||||||||| || || || |||||||| || |||||||||| || || ||||
Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240
Query 108102 CAAACGCAATCGGTCATGAGACTCGTCGTGGGAAGGGCAACATCCTCATCTGTTCTGCTG 108161
| ||| ||||| | | || || | ||||| || || ||| | | |||||||| |||
Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300
Query 108162 ACGTTGCTTCGGCACTCGGCATG--GCAGGCGTTCTGGATTACACCCCTGCTCTCGCTG 108218
|||| ||||| ||| | ||| || || || | || |||| | | |||||| || |||
Sbjct 301 ACGTAGCTTCTGCA-TTGGC-TGCTGCTGGAATCCTTGATTTCGCACCTGCTATCTCTG 357
>seq489705
Length=338
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/80 (86%), Gaps = 2/80 (3%)
Strand=Plus/Minus
Query 157687 TTACGGGGTGTAGCGCAGCTTGGT-AGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTT 157745
||||||||||||||| |||| ||| | |||| | |||||||||| ||||||||||||
Sbjct 218 TTACGGGGTGTAGCGTAGCTCGGTTATCGCGCT-GCTTTGGGAGGGGAAGGTCGCAGGTT 160
Query 157746 CGAATCCTGTCACCCCGACT 157765
||||||||| ||||||||||
Sbjct 159 CGAATCCTGCCACCCCGACT 140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544149171886320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |