Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq509954 167 3e-36 >seq509954 Length=433 Score = 167 bits (184), Expect = 3e-36 Identities = 217/298 (73%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 150332 GCCAGTGCCGAAGCGACATCAGCAGAACAGATCAGGAAGTTGCCCTTTCCTCTACGAGTC 150391 |||| ||| ||||| || |||| |||||||| | ||||| || || || | | || Sbjct 319 GCCAATGCAGAAGCTACGTCAGATGAACAGATAATAAAGTTACCTTTACCACGTCTGGTT 260 Query 150392 TCTTGTGCGATTGCGTTAGCGTCACGCTCGATCTGGAAGAGAAGTCCTTTGAATTTCTCA 150451 |||| |||||| |||||| ||||| || || ||||| | ||||||||||||||| || Sbjct 259 TCTTTAGCGATTTGGTTAGCATCACGTTCAATTTGGAACATAAGTCCTTTGAATTTTTCT 200 Query 150452 ACAGACCATCTGCCGTTGGAGTCAACGTCGAGGTCGAAGATGCCAGCGTTAGC--AACGT 150509 || ||||| | || || | || ||||| | |||||||| |||||||| || ||| Sbjct 199 ACTGACCAGCGACCATTTGCATCTACGTCTAAATCGAAGATACCAGCGTTTGCTGAAC-- 142 Query 150510 TGTTTTGAGCACCTTTCTTTGCAACTGTGTAGACAGTACGGACGACTTCACGGTTGATTT 150569 |||| ||||| |||||| || || || ||||| | | |||||||| |||| Sbjct 141 CAGTTTGTGCACCAGGTTTTGCAGTTGCATATACGGTACGAATTAGCTCACGGTTAATTT 82 Query 150570 CTGCGAGAACTTCGCTAGAAAGGATGTTAGCAAGTTCTTGCTCTGCATCCAGACCATG 150627 |||| |||| ||| | ||||| || || |||||||||| ||||| |||| ||||| Sbjct 81 CTGCAAGAATTTCAGTTGAAAGAATATTTGCAAGTTCTTCTTCTGCGTCCAAGCCATG 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629352191702160