Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_020859.1
Length=175430
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 141 1e-28
seq24926 87.8 2e-12
>seq509954
Length=433
Score = 141 bits (156), Expect = 1e-28
Identities = 222/318 (70%), Gaps = 0/318 (0%)
Strand=Plus/Plus
Query 115785 TTGCTCAGGACCTGAAGGCGATTCACGGTCTGGATGCTGAAACTGAACTGTCCAACATCC 115844
|||||||||| |||| || | || || |||| || ||| ||||| | || || |
Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60
Query 115845 TCAGCACAGAGATTCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCGTCTACACCAACG 115904
| || || |||||||| ||||| |||||||| | |||||||||| || | | |
Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120
Query 115905 CTGTTGCTGGTGCTCAGAACAACACCGCAACTGCTGGTGTCTTCGACCTCGACGTTGACT 115964
| ||||||| || | | |||| |||||| ||||||| | ||||| ||
Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180
Query 115965 CCAACGGTCGCTGGTCTGTTGAGAAGTTCAAGGGTCTCCTGTTCCAGATCGAAAGAGATG 116024
| || ||||||||||| || || || ||||| || || ||||||| || ||| | ||||
Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240
Query 116025 CTAACGCTATCGGTCAGCAAACTCGTCGCGGGAAGGGCAACATCCTGATCTGTTCTGCTG 116084
||||| |||| | | |||| | || || || || ||| | | |||||||| |||
Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300
Query 116085 ACGTTGCTTCTGCACTGG 116102
|||| ||||||||| |||
Sbjct 301 ACGTAGCTTCTGCATTGG 318
>seq24926
Length=5984
Score = 87.8 bits (96), Expect = 2e-12
Identities = 58/63 (92%), Gaps = 1/63 (2%)
Strand=Plus/Plus
Query 161243 CAGTAGCTCAGC-GGATAGAGCAACCGCCTTCTAAGCGGTTGGTCGCAGGTTCAAATCCT 161301
||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||
Sbjct 5765 CAGTAGCTCAGTTGGATAGAGCACCCGCCTTCTAAGCGGGTGGTCGCAGGTTCGAATCCT 5824
Query 161302 GCC 161304
|||
Sbjct 5825 GCC 5827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557561288168800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |