Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020863.1 Length=129155 Score E Sequences producing significant alignments: (Bits) Value seq511551 113 4e-20 seq520202 95.1 1e-14 >seq511551 Length=634 Score = 113 bits (124), Expect = 4e-20 Identities = 208/299 (70%), Gaps = 6/299 (2%) Strand=Plus/Minus Query 104271 CATACTCGCCTTAAAACTACCTGTGATTTCTACAGTTTTATCATAGTTAAGGATATCAGG 104330 ||| || |||||||||| ||| || | |||||| | ||||| ||||| | |||||||| Sbjct 394 CATGCTTGCCTTAAAACCACCAGTAACCTCTACAATCTTATCGTAGTTGATAATATCAGG 335 Query 104331 GTAAAGTCGTTTACTTGAGCATTCTAGAGCTAGTTGTTTGATATCATAATTTGGATCTTC 104390 ||| | || ||||| | || |||||||||| ||||| |||| ||| ||||| ||||| Sbjct 334 GTACATACGCTTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGGTCTTC 275 Query 104391 TGGTTTGTGATTAATACCGTCTCTCACGCTATAAATTAGTTTAGGAAAAACAGGTGT-AA 104449 |||| || | ||||||| | | | || || ||||| || || | ||| Sbjct 274 CTGTTTAAAGTTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAATACCGCTGTCCT 215 Query 104450 CTTT-ATTCTTACCTAATCCGTCAATTTGAACTTGTAAAAT-CATTTCTTGGATTAATTT 104507 |||| || | |||||| || | ||| | || | | || ||||| || |||| || Sbjct 214 CTTTGATGC--ACCTAAGCCTTTAATACGCACCTCAAGGATGGATTTC-TGAATTAGCTT 158 Query 104508 TGCTTCCCATGATGTTCCTAAACCAAAGCCCACAGAAATAAAGGGTGATTGTCCACTTG 104566 | ||||| | || ||||||||||| || || | | |||||| ||||||| ||| Sbjct 157 AGACTCCCAACAAGTACCTAAACCAAAACCTACCGTACAAAAGGGGCTTTGTCCATTTG 99 >seq520202 Length=458 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 66726 AATCTTGTTTTTATAGGTTTTAGCTACAGAATCTTTAAACTCTTGGAAATAAATTGGCTT 66785 |||||| || ||||| || | ||||| || | ||| | |||||||| || || Sbjct 458 AATCTTATTCTTATATGTATCAGCTATCTTGTCACGTAGCTCCTCAAAATAAATAGGTTT 399 Query 66786 CTCTCCACGTCCAGACTTATAACCAATCGTTTTTGATTCGTAATCACGGTAATTTCCGTT 66845 | ||||| |||||| ||||||||||| || || || ||| ||||| || || || Sbjct 398 TGCACCACGCTTAGACTTGTAACCAATCGTCTTAGACTCAGCATCGCGGTAGTTGCCATT 339 Query 66846 TCCGGAAGACATACATAATGTGTAGTCTTCAGATTCCATATTTTCCTTAACACCTTTGAT 66905 || || || ||||| | |||||| |||||||| ||||||| ||| ||||| || | Sbjct 338 ACCCGAGGAGATACAAAGTGTGTAATCTTCAGAGTCCATATGAGTCTTGACACCCTTTAC 279 Query 66906 GTTAGATGCGAATACCATTTCTGCC 66930 ||| ||| || | ||| || ||| Sbjct 278 ATTACTTGCAAAGATCATCTCCGCC 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410525022066952