Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq509954 154 2e-32 >seq509954 Length=433 Score = 154 bits (170), Expect = 2e-32 Identities = 244/350 (70%), Gaps = 0/350 (0%) Strand=Plus/Plus Query 93637 TTGCTCAGGACTTGAAAGCAATTCATGGTCTTGATGCTGAGCAGGAACTTTCCAACATCC 93696 |||||||||| ||||||| | ||||| | || || || | |||||| | || || | Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60 Query 93697 TCTCTACTGAGATCCTTGCTGAAATCAACAGAGAAGTTGTTAGAACTGTATACACCAACG 93756 | || ||||| || ||||| ||||| ||| | || | || | || ||||| | | | Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120 Query 93757 CACGTCCTGGCGCTCAAAACAATACTGCTACTGGTGGTATCTTTGACCTTGACGTTGACT 93816 || ||||| || |||| | | || | | ||||||||| || | ||||| || Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180 Query 93817 CTAATGGTAGATGGTCTGTTGAGAAATTCAAGGGACTTCTTTTCCAAATTGAGAGAGACG 93876 | |||||| | ||||| || || |||||||| |||||| | ||||||||||| | || | Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240 Query 93877 CTAACGCGATCGGTCATGAGACAAGACGCGGGAAGGGCAACATCTTGATCTGCTCTGCAG 93936 ||||| |||| | | || || ||||| || || || ||| | | ||||| || | | Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300 Query 93937 ACGTTGCTTCTGCTCTTGCAATGGCTGGTGTACTTGACTACGCTCCTGCT 93986 |||| |||||||| | || ||||| | ||||| | ||| |||||| Sbjct 301 ACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCT 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580993549159120