Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021062.1 Length=40192 Score E Sequences producing significant alignments: (Bits) Value seq512931 646 0.0 seq489868 526 6e-145 seq524349 453 3e-123 seq518992 401 2e-107 seq501937 385 1e-102 seq521066 334 2e-87 seq500082 237 4e-58 seq498418 152 1e-32 >seq512931 Length=538 Score = 646 bits (716), Expect = 0.0 Identities = 466/538 (87%), Gaps = 0/538 (0%) Strand=Plus/Plus Query 38237 CCTGCGCGTCCTGACCACTCGCCCTCGGTGAAGTCCGTAGGTGTGACTGGTGGTATGACT 38296 ||||| |||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACT 60 Query 38297 GGTAGCCGTGCTGACATCCTTATCGCGGATGACGTTGAGGTTCCCGGCAACTCCGGTACG 38356 |||||||||||||||||||| || ||||||||||||||||| ||||||||||| || || Sbjct 61 GGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACA 120 Query 38357 CAATCCGCAAGGGATCACCTTGGGGAACTCGTGAAGGAATTCGATGCGATCCTGAAACCA 38416 || |||||||||||||||||||| || || || ||||||||||||||||||||||| || Sbjct 121 CAGTCCGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT 180 Query 38417 GACGGCACGATCATCTATCTGGGAACCCCACAGACCGAAATGACCCTTTACCGGGAACTT 38476 ||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct 181 GACGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTT 240 Query 38477 GAGGATCGTGGCTACTCGACGACTATCTGGCCTGCACGGTATCCTCGGGATGTCGCTGAC 38536 ||||| || |||||||||||||| |||||||||||||| || ||||||||||| |||||| Sbjct 241 GAGGACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGAC 300 Query 38537 CTTGAATCGTACTTCCACGCCAAGGGCAACCGCTCGCGTCTGGACCCTACGATGCTCAAG 38596 ||||| || |||| |||||||||||||| ||||| |||||||||| ||| ||||||||| Sbjct 301 CTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG 360 Query 38597 GAGCTTGAAGCAGATCCACGCCTGTACTGGAAGCCTACTGACCCTATCCGATTCGATGAA 38656 ||||| |||| || |||| |||||||||||| |||||||| ||||||||||| Sbjct 361 GAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGAT 420 Query 38657 GAGGACCTGAGGGAACGTGAGCTGTCGTATGGCAAGGGTGGCTTCGCATTGCAGTTCATG 38716 || |||||| | || || || || || |||||||||||||||||||| | ||||||||| Sbjct 421 GAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATG 480 Query 38717 CTGAACCCTAACCTGTCCGACATCGAGAAGTACCCTCTGAAGCTGCGTGACTGGATCG 38774 || ||||| ||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct 481 CTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538 >seq489868 Length=343 Score = 526 bits (582), Expect = 6e-145 Identities = 324/343 (94%), Gaps = 2/343 (1%) Strand=Plus/Plus Query 2169 GTCGTGAACGTGATCCACAGTGACATCGGTCTGGA-CGCTTCCAGCACCGTGCAAGCTCT 2227 ||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1 GTCGTGAACGTAATCAACAGTGACATCGGTCTGGATCGCTTCCAGCACCGTGCAAGCTCT 60 Query 2228 GGTCGAGTAGCGTTAATCGGTGGCCTTCT-CTTGAGGGTCACCCGTTAAATCCACTCACT 2286 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 61 GGTCGAGTAGCGTTAATCGGTGGCCTTCTTCTTGAGGGTCACCCGTTAAATCCACTCACT 120 Query 2287 GGTAACACACCATGTCCCTTAACGGTATATTCTTCTTCGGCACCTTCGCCATCCTCACCG 2346 |||| |||||||||||||| ||||| || | |||||||||||||||||||||||||| | Sbjct 121 GGTACCACACCATGTCCCTAAACGGCATCTGTTTCTTCGGCACCTTCGCCATCCTCACTG 180 Query 2347 CAATCTACGGGTTCCCACTATGATCAGCCTGAACCACACCAGCTTCACCAGCTTGAGCGC 2406 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 181 CAATCTACGGGTTCCCACTATGATCCGCCTGAATCACACCAGCTTCACCAGCTTGAGCGC 240 Query 2407 CAACATCGTCAACGCAATGGCCTTTGTCCTGCACACTGGCGACAGCAAGCGCTTGATCAA 2466 ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 241 CAATATCGTCAACGCAATGGCCTTTGTCCTGCACACTGGCGACAGCACGCGCTTGATCAA 300 Query 2467 CCGTCGCGGCAACCCATGGTTGTTGGTGACTCTCGTTCGTGAC 2509 ||||||||| || |||||| |||||||||| |||||||||||| Sbjct 301 CCGTCGCGGTAAACCATGGCTGTTGGTGACCCTCGTTCGTGAC 343 >seq524349 Length=315 Score = 453 bits (502), Expect = 3e-123 Identities = 265/274 (97%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 13392 GACCAAGTGTGGAACGCCCAGAAGTACGTCCCTGATGGTGTGGTCTCGGCGAAGTCCCTT 13451 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 GACCAAGTGTGGAACGCCCAGAAGTACGTCCCTGATGGTGTGGTCTCGGCGAAGTACCTT 60 Query 13452 AAGGGCCGCATCAAGGAAAAGAAGGTTATCGCTTCGATGCCTTTGGTTGGACCTCACGAG 13511 |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 61 AAGGGCCGCATCAAAGAAAAGAAGGTTATCACTTCGATGCCTTTGGTGGGACCTCACGAG 120 Query 13512 CTGTCCCGCATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGTTCC 13571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 121 CTGTCCCGCATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGCTCC 180 Query 13572 GGCTCGGGTAAGTCCACGTTCGTCCGTCAGAACACCTACAACCTCTTCCATGAGGCGAAG 13631 |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| | Sbjct 181 GGCTCGGGCAAGTCCACGTTCGTCCGACAGAACACCTACAACGTCTTCCATGAGGCGACG 240 Query 13632 ATCCCGGTGGGCGTTGCGATGCTTGAGGAATCCG 13665 |||||||||||||||||||||||||||||||||| Sbjct 241 ATCCCGGTGGGCGTTGCGATGCTTGAGGAATCCG 274 >seq518992 Length=261 Score = 401 bits (444), Expect = 2e-107 Identities = 243/257 (95%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 10477 CAAAGCTGCCCCATACGCGGCGATCCAAAAGCCCGACTTCGGCACCACCGAGTTCCCGCA 10536 ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct 260 CAAGGCTGCCCCATATGCGGCGATCCAAAAGCCCGACTTCGGCACCACTGAGTTCCCACA 201 Query 10537 ACCACGCGGTGAGTACAAGGTGAACCTGATCGTGCCCATCAAGGATGCACAGGCTGACAT 10596 ||| || || |||||||||||||||||||||||| || | ||||||||||| |||||||| Sbjct 200 ACCTCGTGGCGAGTACAAGGTGAACCTGATCGTGTCCTTGAAGGATGCACAAGCTGACAT 141 Query 10597 CAAGCGCATCACCAAGATTTACGAGGACTCCTACGCCGAGTTCTTGGCTGACCACGAAGC 10656 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 140 CAAGCGCATCACCAAGATTTACGAGGACTCCTACGCCGAGTTCTTGGCTGAACACGAAGC 81 Query 10657 GAACCCGCCAAAGGTCGCTGCTGGCAAGCGTCCAGTTCCGGTCCGTCAAGGTGACCTTCC 10716 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 80 GAACCCGCCAAAGGTCGCTGCTGGCAAGCGTCCCGTACCGGTCCGTCAAGGTGACCTTCC 21 Query 10717 GTTCTTCGAGGACGGCA 10733 ||||||||||||||||| Sbjct 20 GTTCTTCGAGGACGGCA 4 >seq501937 Length=338 Score = 385 bits (426), Expect = 1e-102 Identities = 291/340 (86%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 34914 ACCAAGTACCGGGTGCCTCATGGGCATTGTCGGCTGGACAGGCTGCGCACTCTGCTGTGG 34973 ||||||||||||||| ||||||||| | | ||||| ||||| | ||||||| | | Sbjct 1 ACCAAGTACCGGGTGTCTCATGGGCTCTCGCTGCTGGTCAGGCGGGGCACTCTCTGGCTG 60 Query 34974 GCTTGGCGGGATCTAACGGTCGCCGTCAGGATCAAGAGTACATGACCAGCTTCTACAACG 35033 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 61 GCTTGGCGGGATCTAACGGTCGCCGTCAGGACCAAGAGTACATGACCAGTCTCTACAACG 120 Query 35034 GTCTCCGTGGGATCATCCCTAACGACCCGGCCACTCAGTTCCTCCTGATGAAGATCATGG 35093 | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 121 GGCTCCGTGGGATCAT-CCTAACGACCCGGCCTCTCAGTTCCTCCTGATGAAGATCATGG 179 Query 35094 AAGAGCAGGGAATCGAGGCACGTTAAAACCACTCACCCAAACCGGGAGGCTTGCACAGCT 35153 |||||||||| ||||| ||||| |||||||||||||| | ||||||| |||||||||||| Sbjct 180 AAGAGCAGGGTATCGAAGCACGGTAAAACCACTCACCTATACCGGGA-GCTTGCACAGCT 238 Query 35154 CCCTTCAACATAAGGAGGCCCCAATGGCTGAAGCTCCAAAGACTACGGTAACGTATCCGC 35213 ||| | ||||||||| || | ||||| |||||||||||| | ||||||||| Sbjct 239 CCCCTTTCCATAAGGAGACCTCTATGGCACTCGCTCCAAAGACTGTCTTGGCGTATCCGC 298 Query 35214 TCGACGGTGCGAACCGAGACTTTCTGATCCCCTTCGAGTA 35253 | ||||||||||| |||||||| |||||||||| || || Sbjct 299 TTGACGGTGCGAATCGAGACTTCGTGATCCCCTTTGAATA 338 >seq521066 Length=280 Score = 334 bits (370), Expect = 2e-87 Identities = 242/280 (86%), Gaps = 0/280 (0%) Strand=Plus/Plus Query 20017 CATGGAAGCCAACAGCTACCGCACGACCCTTCACGAGCTGATCCGTCAGTTGGTGATCGC 20076 ||||||||||||||| |||||||| || | ||||||||||| ||||||||||||||||| Sbjct 1 CATGGAAGCCAACAGTTACCGCACCACGTTGCACGAGCTGATTCGTCAGTTGGTGATCGC 60 Query 20077 TGGTGCTGGCTGCCTGTACCTTCCGCCACCTGAGAGTTCGTCTCAAGGGTCGCCCATGAA 20136 ||| ||||| |||||||||||||| |||||| ||||| | |||||| || ||||| Sbjct 61 TGGGTCTGGCCTGCTGTACCTTCCGCCTCCTGAGGGTTCGACCCAAGGGAGCCCTATGAA 120 Query 20137 GCTCTACACGCTGCACAATCACGTCGTCCAACGCGATGCCTTCGGTAACGTCTTGCAAAT 20196 |||||||||||||||||| ||||| |||||||| || ||||||| |||||| | || || Sbjct 121 GCTCTACACGCTGCACAACCACGTAGTCCAACGGGACTCCTTCGGGAACGTCCTACAGAT 180 Query 20197 CTGCACGCTCGACAGAGTGGCCTTTGCGGCCCTTCCTGAAGACGTTCGGACCAAACTTGA 20256 | |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 181 CGTTACGCTCGACAAGGTGGCCTTTGCGGCCCTTCCTGAAGACGTGCGGTCCAAACTTGA 240 Query 20257 TGGGGAGCATAAGCCCGATGAAGAGATCGAAGTCTACACC 20296 || ||||||||||||||||||||||||||||||| |||| Sbjct 241 CGGAGAGCATAAGCCCGATGAAGAGATCGAAGTCTTCACC 280 >seq500082 Length=313 Score = 237 bits (262), Expect = 4e-58 Identities = 235/302 (78%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 5607 GAAGACGGTATCCAATGGCTCATGATCCACGGTGCGAATACCGCTGGTGTCGATAAGGTT 5666 ||||| ||||| |||||||||||||| ||||| || || || ||||| ||||||||||| Sbjct 312 GAAGATGGTATTCAATGGCTCATGATTCACGGGGCCAACACTGCTGGGGTCGATAAGGTC 253 Query 5667 CCTTTCGATGAACGCAAGCAATGGGTTCGAGACAATGAA--GACTGCATCCTCGGTTGCG 5724 ||||||||| ||||||||||||||||||| ||||||||| |||| |||||| | |||| Sbjct 252 CCTTTCGATCAACGCAAGCAATGGGTTCGTGACAATGAATCGACT--ATCCTCCGATGCG 195 Query 5725 CAAGAGACCCACTTCAGAACACGGAATGGATGTCAATGGATTCTCCCTTCTGCTTCCTTG 5784 | |||||| || |||| || |||||| ||||| || |||||||| ||| | | Sbjct 194 CTGAAGACCCGCTCACTCACACCGAGTGGATGGGGATGGACTCGCCCTTCTGTTTCTTGG 135 Query 5785 CCTTCTGTTTTGAGTGGGCTGGAGTCAAGCAGGATGGTGCAAACCACGTATCCGCTCTGC 5844 | ||||| || |||||||| || ||| | ||||| || ||| ||||||||| | Sbjct 134 CGTTCTGCTTCGAGTGGGCCGGTGTCGTTCGCGATGGAGCTGCACACCGATCCGCTCTAC 75 Query 5845 CCATCGCTTTTGATGGGTCTTGCTCAGGCATTCAGCACTTTTCTGCAATGCTCCGAGACG 5904 | ||||||||||| || || || || || ||||| |||||||| |||||||| |||| Sbjct 74 CAATCGCTTTTGACGGAAGCTGTTCGGGTATCCAGCATTTTTCTGCCATGCTCCGGGACG 15 Query 5905 AA 5906 || Sbjct 14 AA 13 >seq498418 Length=347 Score = 152 bits (168), Expect = 1e-32 Identities = 146/185 (79%), Gaps = 13/185 (7%) Strand=Plus/Plus Query 688 ACGCTCTTTAACAACATGACGCTACATGGTCTGCAAGGCTCCGAAAG----GACACCTAC 743 |||||||||||||| || | ||||| | |||| ||| || || | ||| Sbjct 28 ACGCTCTTTAACAATTTGGAATT---TGGTCGGTCAGGCACCGTAACAGGTGAAAGATAC 84 Query 744 AGGCATCGCTACGAAGGCAAGCACTGAGCCTTCTCATAGCACCTTTGAGGGCCTGAACGG 803 |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct 85 CGGCATCGCTACGAAGGCAAGCACTGAGCCTTCCTACAGCACCTTTGAGGGCCCGAACGG 144 Query 804 ATGTTACGGGTAGGGTCAGCAAGGGTCTTATGGGAATCCCTTAGACAACGC----TGGAG 859 |||| ||||||| |||||||||||||||| |||||| |||||| ||||| |||| Sbjct 145 ATGTCACGGGTACGGTCAGCAAGGGTCTTGTGGGAACACCTTAG--AACGCCAATAGGAG 202 Query 860 CAACA 864 ||||| Sbjct 203 CAACA 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127690961722296