Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021062.1
Length=40192
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 646 0.0
seq489868 526 6e-145
seq524349 453 3e-123
seq518992 401 2e-107
seq501937 385 1e-102
seq521066 334 2e-87
seq500082 237 4e-58
seq498418 152 1e-32
>seq512931
Length=538
Score = 646 bits (716), Expect = 0.0
Identities = 466/538 (87%), Gaps = 0/538 (0%)
Strand=Plus/Plus
Query 38237 CCTGCGCGTCCTGACCACTCGCCCTCGGTGAAGTCCGTAGGTGTGACTGGTGGTATGACT 38296
||||| |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct 1 CCTGCTCGTCCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACT 60
Query 38297 GGTAGCCGTGCTGACATCCTTATCGCGGATGACGTTGAGGTTCCCGGCAACTCCGGTACG 38356
|||||||||||||||||||| || ||||||||||||||||| ||||||||||| || ||
Sbjct 61 GGTAGCCGTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACA 120
Query 38357 CAATCCGCAAGGGATCACCTTGGGGAACTCGTGAAGGAATTCGATGCGATCCTGAAACCA 38416
|| |||||||||||||||||||| || || || ||||||||||||||||||||||| ||
Sbjct 121 CAGTCCGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT 180
Query 38417 GACGGCACGATCATCTATCTGGGAACCCCACAGACCGAAATGACCCTTTACCGGGAACTT 38476
||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||
Sbjct 181 GACGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTT 240
Query 38477 GAGGATCGTGGCTACTCGACGACTATCTGGCCTGCACGGTATCCTCGGGATGTCGCTGAC 38536
||||| || |||||||||||||| |||||||||||||| || ||||||||||| ||||||
Sbjct 241 GAGGACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGAC 300
Query 38537 CTTGAATCGTACTTCCACGCCAAGGGCAACCGCTCGCGTCTGGACCCTACGATGCTCAAG 38596
||||| || |||| |||||||||||||| ||||| |||||||||| ||| |||||||||
Sbjct 301 CTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG 360
Query 38597 GAGCTTGAAGCAGATCCACGCCTGTACTGGAAGCCTACTGACCCTATCCGATTCGATGAA 38656
||||| |||| || |||| |||||||||||| |||||||| |||||||||||
Sbjct 361 GAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGAT 420
Query 38657 GAGGACCTGAGGGAACGTGAGCTGTCGTATGGCAAGGGTGGCTTCGCATTGCAGTTCATG 38716
|| |||||| | || || || || || |||||||||||||||||||| | |||||||||
Sbjct 421 GAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATG 480
Query 38717 CTGAACCCTAACCTGTCCGACATCGAGAAGTACCCTCTGAAGCTGCGTGACTGGATCG 38774
|| ||||| ||||| |||||||||||||||||| ||||||||||||| |||||||
Sbjct 481 CTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538
>seq489868
Length=343
Score = 526 bits (582), Expect = 6e-145
Identities = 324/343 (94%), Gaps = 2/343 (1%)
Strand=Plus/Plus
Query 2169 GTCGTGAACGTGATCCACAGTGACATCGGTCTGGA-CGCTTCCAGCACCGTGCAAGCTCT 2227
||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1 GTCGTGAACGTAATCAACAGTGACATCGGTCTGGATCGCTTCCAGCACCGTGCAAGCTCT 60
Query 2228 GGTCGAGTAGCGTTAATCGGTGGCCTTCT-CTTGAGGGTCACCCGTTAAATCCACTCACT 2286
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 GGTCGAGTAGCGTTAATCGGTGGCCTTCTTCTTGAGGGTCACCCGTTAAATCCACTCACT 120
Query 2287 GGTAACACACCATGTCCCTTAACGGTATATTCTTCTTCGGCACCTTCGCCATCCTCACCG 2346
|||| |||||||||||||| ||||| || | |||||||||||||||||||||||||| |
Sbjct 121 GGTACCACACCATGTCCCTAAACGGCATCTGTTTCTTCGGCACCTTCGCCATCCTCACTG 180
Query 2347 CAATCTACGGGTTCCCACTATGATCAGCCTGAACCACACCAGCTTCACCAGCTTGAGCGC 2406
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 181 CAATCTACGGGTTCCCACTATGATCCGCCTGAATCACACCAGCTTCACCAGCTTGAGCGC 240
Query 2407 CAACATCGTCAACGCAATGGCCTTTGTCCTGCACACTGGCGACAGCAAGCGCTTGATCAA 2466
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 241 CAATATCGTCAACGCAATGGCCTTTGTCCTGCACACTGGCGACAGCACGCGCTTGATCAA 300
Query 2467 CCGTCGCGGCAACCCATGGTTGTTGGTGACTCTCGTTCGTGAC 2509
||||||||| || |||||| |||||||||| ||||||||||||
Sbjct 301 CCGTCGCGGTAAACCATGGCTGTTGGTGACCCTCGTTCGTGAC 343
>seq524349
Length=315
Score = 453 bits (502), Expect = 3e-123
Identities = 265/274 (97%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 13392 GACCAAGTGTGGAACGCCCAGAAGTACGTCCCTGATGGTGTGGTCTCGGCGAAGTCCCTT 13451
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 GACCAAGTGTGGAACGCCCAGAAGTACGTCCCTGATGGTGTGGTCTCGGCGAAGTACCTT 60
Query 13452 AAGGGCCGCATCAAGGAAAAGAAGGTTATCGCTTCGATGCCTTTGGTTGGACCTCACGAG 13511
|||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 61 AAGGGCCGCATCAAAGAAAAGAAGGTTATCACTTCGATGCCTTTGGTGGGACCTCACGAG 120
Query 13512 CTGTCCCGCATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGTTCC 13571
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 121 CTGTCCCGCATGACCAAGAACATCCGCGAAGGCGAAGTCATTCTGGTCACCTCGGGCTCC 180
Query 13572 GGCTCGGGTAAGTCCACGTTCGTCCGTCAGAACACCTACAACCTCTTCCATGAGGCGAAG 13631
|||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| |
Sbjct 181 GGCTCGGGCAAGTCCACGTTCGTCCGACAGAACACCTACAACGTCTTCCATGAGGCGACG 240
Query 13632 ATCCCGGTGGGCGTTGCGATGCTTGAGGAATCCG 13665
||||||||||||||||||||||||||||||||||
Sbjct 241 ATCCCGGTGGGCGTTGCGATGCTTGAGGAATCCG 274
>seq518992
Length=261
Score = 401 bits (444), Expect = 2e-107
Identities = 243/257 (95%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 10477 CAAAGCTGCCCCATACGCGGCGATCCAAAAGCCCGACTTCGGCACCACCGAGTTCCCGCA 10536
||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 260 CAAGGCTGCCCCATATGCGGCGATCCAAAAGCCCGACTTCGGCACCACTGAGTTCCCACA 201
Query 10537 ACCACGCGGTGAGTACAAGGTGAACCTGATCGTGCCCATCAAGGATGCACAGGCTGACAT 10596
||| || || |||||||||||||||||||||||| || | ||||||||||| ||||||||
Sbjct 200 ACCTCGTGGCGAGTACAAGGTGAACCTGATCGTGTCCTTGAAGGATGCACAAGCTGACAT 141
Query 10597 CAAGCGCATCACCAAGATTTACGAGGACTCCTACGCCGAGTTCTTGGCTGACCACGAAGC 10656
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 140 CAAGCGCATCACCAAGATTTACGAGGACTCCTACGCCGAGTTCTTGGCTGAACACGAAGC 81
Query 10657 GAACCCGCCAAAGGTCGCTGCTGGCAAGCGTCCAGTTCCGGTCCGTCAAGGTGACCTTCC 10716
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 80 GAACCCGCCAAAGGTCGCTGCTGGCAAGCGTCCCGTACCGGTCCGTCAAGGTGACCTTCC 21
Query 10717 GTTCTTCGAGGACGGCA 10733
|||||||||||||||||
Sbjct 20 GTTCTTCGAGGACGGCA 4
>seq501937
Length=338
Score = 385 bits (426), Expect = 1e-102
Identities = 291/340 (86%), Gaps = 2/340 (1%)
Strand=Plus/Plus
Query 34914 ACCAAGTACCGGGTGCCTCATGGGCATTGTCGGCTGGACAGGCTGCGCACTCTGCTGTGG 34973
||||||||||||||| ||||||||| | | ||||| ||||| | ||||||| | |
Sbjct 1 ACCAAGTACCGGGTGTCTCATGGGCTCTCGCTGCTGGTCAGGCGGGGCACTCTCTGGCTG 60
Query 34974 GCTTGGCGGGATCTAACGGTCGCCGTCAGGATCAAGAGTACATGACCAGCTTCTACAACG 35033
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 61 GCTTGGCGGGATCTAACGGTCGCCGTCAGGACCAAGAGTACATGACCAGTCTCTACAACG 120
Query 35034 GTCTCCGTGGGATCATCCCTAACGACCCGGCCACTCAGTTCCTCCTGATGAAGATCATGG 35093
| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 121 GGCTCCGTGGGATCAT-CCTAACGACCCGGCCTCTCAGTTCCTCCTGATGAAGATCATGG 179
Query 35094 AAGAGCAGGGAATCGAGGCACGTTAAAACCACTCACCCAAACCGGGAGGCTTGCACAGCT 35153
|||||||||| ||||| ||||| |||||||||||||| | ||||||| ||||||||||||
Sbjct 180 AAGAGCAGGGTATCGAAGCACGGTAAAACCACTCACCTATACCGGGA-GCTTGCACAGCT 238
Query 35154 CCCTTCAACATAAGGAGGCCCCAATGGCTGAAGCTCCAAAGACTACGGTAACGTATCCGC 35213
||| | ||||||||| || | ||||| |||||||||||| | |||||||||
Sbjct 239 CCCCTTTCCATAAGGAGACCTCTATGGCACTCGCTCCAAAGACTGTCTTGGCGTATCCGC 298
Query 35214 TCGACGGTGCGAACCGAGACTTTCTGATCCCCTTCGAGTA 35253
| ||||||||||| |||||||| |||||||||| || ||
Sbjct 299 TTGACGGTGCGAATCGAGACTTCGTGATCCCCTTTGAATA 338
>seq521066
Length=280
Score = 334 bits (370), Expect = 2e-87
Identities = 242/280 (86%), Gaps = 0/280 (0%)
Strand=Plus/Plus
Query 20017 CATGGAAGCCAACAGCTACCGCACGACCCTTCACGAGCTGATCCGTCAGTTGGTGATCGC 20076
||||||||||||||| |||||||| || | ||||||||||| |||||||||||||||||
Sbjct 1 CATGGAAGCCAACAGTTACCGCACCACGTTGCACGAGCTGATTCGTCAGTTGGTGATCGC 60
Query 20077 TGGTGCTGGCTGCCTGTACCTTCCGCCACCTGAGAGTTCGTCTCAAGGGTCGCCCATGAA 20136
||| ||||| |||||||||||||| |||||| ||||| | |||||| || |||||
Sbjct 61 TGGGTCTGGCCTGCTGTACCTTCCGCCTCCTGAGGGTTCGACCCAAGGGAGCCCTATGAA 120
Query 20137 GCTCTACACGCTGCACAATCACGTCGTCCAACGCGATGCCTTCGGTAACGTCTTGCAAAT 20196
|||||||||||||||||| ||||| |||||||| || ||||||| |||||| | || ||
Sbjct 121 GCTCTACACGCTGCACAACCACGTAGTCCAACGGGACTCCTTCGGGAACGTCCTACAGAT 180
Query 20197 CTGCACGCTCGACAGAGTGGCCTTTGCGGCCCTTCCTGAAGACGTTCGGACCAAACTTGA 20256
| |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 181 CGTTACGCTCGACAAGGTGGCCTTTGCGGCCCTTCCTGAAGACGTGCGGTCCAAACTTGA 240
Query 20257 TGGGGAGCATAAGCCCGATGAAGAGATCGAAGTCTACACC 20296
|| ||||||||||||||||||||||||||||||| ||||
Sbjct 241 CGGAGAGCATAAGCCCGATGAAGAGATCGAAGTCTTCACC 280
>seq500082
Length=313
Score = 237 bits (262), Expect = 4e-58
Identities = 235/302 (78%), Gaps = 4/302 (1%)
Strand=Plus/Minus
Query 5607 GAAGACGGTATCCAATGGCTCATGATCCACGGTGCGAATACCGCTGGTGTCGATAAGGTT 5666
||||| ||||| |||||||||||||| ||||| || || || ||||| |||||||||||
Sbjct 312 GAAGATGGTATTCAATGGCTCATGATTCACGGGGCCAACACTGCTGGGGTCGATAAGGTC 253
Query 5667 CCTTTCGATGAACGCAAGCAATGGGTTCGAGACAATGAA--GACTGCATCCTCGGTTGCG 5724
||||||||| ||||||||||||||||||| ||||||||| |||| |||||| | ||||
Sbjct 252 CCTTTCGATCAACGCAAGCAATGGGTTCGTGACAATGAATCGACT--ATCCTCCGATGCG 195
Query 5725 CAAGAGACCCACTTCAGAACACGGAATGGATGTCAATGGATTCTCCCTTCTGCTTCCTTG 5784
| |||||| || |||| || |||||| ||||| || |||||||| ||| | |
Sbjct 194 CTGAAGACCCGCTCACTCACACCGAGTGGATGGGGATGGACTCGCCCTTCTGTTTCTTGG 135
Query 5785 CCTTCTGTTTTGAGTGGGCTGGAGTCAAGCAGGATGGTGCAAACCACGTATCCGCTCTGC 5844
| ||||| || |||||||| || ||| | ||||| || ||| ||||||||| |
Sbjct 134 CGTTCTGCTTCGAGTGGGCCGGTGTCGTTCGCGATGGAGCTGCACACCGATCCGCTCTAC 75
Query 5845 CCATCGCTTTTGATGGGTCTTGCTCAGGCATTCAGCACTTTTCTGCAATGCTCCGAGACG 5904
| ||||||||||| || || || || || ||||| |||||||| |||||||| ||||
Sbjct 74 CAATCGCTTTTGACGGAAGCTGTTCGGGTATCCAGCATTTTTCTGCCATGCTCCGGGACG 15
Query 5905 AA 5906
||
Sbjct 14 AA 13
>seq498418
Length=347
Score = 152 bits (168), Expect = 1e-32
Identities = 146/185 (79%), Gaps = 13/185 (7%)
Strand=Plus/Plus
Query 688 ACGCTCTTTAACAACATGACGCTACATGGTCTGCAAGGCTCCGAAAG----GACACCTAC 743
|||||||||||||| || | ||||| | |||| ||| || || | |||
Sbjct 28 ACGCTCTTTAACAATTTGGAATT---TGGTCGGTCAGGCACCGTAACAGGTGAAAGATAC 84
Query 744 AGGCATCGCTACGAAGGCAAGCACTGAGCCTTCTCATAGCACCTTTGAGGGCCTGAACGG 803
|||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||
Sbjct 85 CGGCATCGCTACGAAGGCAAGCACTGAGCCTTCCTACAGCACCTTTGAGGGCCCGAACGG 144
Query 804 ATGTTACGGGTAGGGTCAGCAAGGGTCTTATGGGAATCCCTTAGACAACGC----TGGAG 859
|||| ||||||| |||||||||||||||| |||||| |||||| ||||| ||||
Sbjct 145 ATGTCACGGGTACGGTCAGCAAGGGTCTTGTGGGAACACCTTAG--AACGCCAATAGGAG 202
Query 860 CAACA 864
|||||
Sbjct 203 CAACA 207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127690961722296
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