Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 116 4e-21
>seq509954
Length=433
Score = 116 bits (128), Expect = 4e-21
Identities = 232/340 (68%), Gaps = 4/340 (1%)
Strand=Plus/Minus
Query 121058 AGCAGGTGCATAGTCAAGAACGCCTGC--CATGCCGAGTGCAGAAACAACATCAGCAGAA 121115
||||||||| | ||||| | || || || ||| | ||||||| | || |||| |||
Sbjct 350 AGCAGGTGCGAAATCAAGGATTCCAGCAGCA-GCCAA-TGCAGAAGCTACGTCAGATGAA 293
Query 121116 GCGATCAGGATGTTGCCCTTCCCGCGACGAGTTTGCTGACCGATTGCGTTTGCATCTCTT 121175
||| | | ||| || || || || | |||| | | ||||| ||| ||||| | |
Sbjct 292 CAGATAATAAAGTTACCTTTACCACGTCTGGTTTCTTTAGCGATTTGGTTAGCATCACGT 233
Query 121176 TCGATCTGGAACAGAAGACCCTTGAACTTCTCAACAGACCAGCGACCATTGGAGTCAACG 121235
|| || ||||||| ||| || ||||| || || || |||||||||||||| | || |||
Sbjct 232 TCAATTTGGAACATAAGTCCTTTGAATTTTTCTACTGACCAGCGACCATTTGCATCTACG 173
Query 121236 TCGAGGTCGAAGATACCAGCGTTAGCGGTATTGTTCTGAGCACCAGCAACAGCGTTTGTG 121295
|| | ||||||||||||||||| || | | | || ||||||| || |||
Sbjct 172 TCTAAATCGAAGATACCAGCGTTTGCTGAACCAGTTTGTGCACCAGGTTTTGCAGTTGCA 113
Query 121296 TAGATAGTTCTAACAACTTCTCTGTTGATTTCTGCCAAGATCTCAGTGCTGAGAATGTTG 121355
|| | || | || | || | ||| |||||||| | || ||||| ||||| ||
Sbjct 112 TATACGGTACGAATTAGCTCACGGTTAATTTCTGCAAGAATTTCAGTTGAAAGAATATTT 53
Query 121356 GACAGCTCTTGCTCAGCATCCAGACCATGAATCGCCTTCA 121395
| || |||| || || |||| ||||| | || ||||
Sbjct 52 GCAAGTTCTTCTTCTGCGTCCAAGCCATGTACAGCTTTCA 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568296703358640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |