Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq509954 116 4e-21 >seq509954 Length=433 Score = 116 bits (128), Expect = 4e-21 Identities = 232/340 (68%), Gaps = 4/340 (1%) Strand=Plus/Minus Query 121058 AGCAGGTGCATAGTCAAGAACGCCTGC--CATGCCGAGTGCAGAAACAACATCAGCAGAA 121115 ||||||||| | ||||| | || || || ||| | ||||||| | || |||| ||| Sbjct 350 AGCAGGTGCGAAATCAAGGATTCCAGCAGCA-GCCAA-TGCAGAAGCTACGTCAGATGAA 293 Query 121116 GCGATCAGGATGTTGCCCTTCCCGCGACGAGTTTGCTGACCGATTGCGTTTGCATCTCTT 121175 ||| | | ||| || || || || | |||| | | ||||| ||| ||||| | | Sbjct 292 CAGATAATAAAGTTACCTTTACCACGTCTGGTTTCTTTAGCGATTTGGTTAGCATCACGT 233 Query 121176 TCGATCTGGAACAGAAGACCCTTGAACTTCTCAACAGACCAGCGACCATTGGAGTCAACG 121235 || || ||||||| ||| || ||||| || || || |||||||||||||| | || ||| Sbjct 232 TCAATTTGGAACATAAGTCCTTTGAATTTTTCTACTGACCAGCGACCATTTGCATCTACG 173 Query 121236 TCGAGGTCGAAGATACCAGCGTTAGCGGTATTGTTCTGAGCACCAGCAACAGCGTTTGTG 121295 || | ||||||||||||||||| || | | | || ||||||| || ||| Sbjct 172 TCTAAATCGAAGATACCAGCGTTTGCTGAACCAGTTTGTGCACCAGGTTTTGCAGTTGCA 113 Query 121296 TAGATAGTTCTAACAACTTCTCTGTTGATTTCTGCCAAGATCTCAGTGCTGAGAATGTTG 121355 || | || | || | || | ||| |||||||| | || ||||| ||||| || Sbjct 112 TATACGGTACGAATTAGCTCACGGTTAATTTCTGCAAGAATTTCAGTTGAAAGAATATTT 53 Query 121356 GACAGCTCTTGCTCAGCATCCAGACCATGAATCGCCTTCA 121395 | || |||| || || |||| ||||| | || |||| Sbjct 52 GCAAGTTCTTCTTCTGCGTCCAAGCCATGTACAGCTTTCA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568296703358640