Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq496362 178 2e-39
>seq496362
Length=882
Score = 178 bits (196), Expect = 2e-39
Identities = 471/709 (66%), Gaps = 20/709 (3%)
Strand=Plus/Minus
Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAAT-CGCAATTCATACCTA 18038
||| | |||||| | |||||| || | |||||| | ||| |||| |||| |||||||| |
Sbjct 811 TAAAAGTCTATCGGTTACAAACTCTAAATATTGCGTCATTAAATTCGCA-TTCATACCAA 753
Query 18039 GTAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTA 18098
|| || | ||| || | || ||||||||||| | || || | | | || | |
Sbjct 752 TTAAACTTACAGGAAGTGATTCTGTAATAAATTCTCTTTCGATGTTTAAGGCGTCAATAA 693
Query 18099 TTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAAC 18158
| ||| || | | || |||||||| |||||| | | ||||| | | || | |
Sbjct 692 TAATGGTTCTGATTCTGTCTTTTGGCACTTTATTTACCAAGTGATGTTGGTGCAA-ATGC 634
Query 18159 AC-GCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217
|| || |||||| ||| | |||||| || | || || |||||||| || || ||
Sbjct 633 ACTGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAAT 574
Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277
|| ||||| | ||||| |||||| | ||| || || || ||| || || |||||
Sbjct 573 CCTGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAA 514
Query 18278 ATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAGT 18337
|| || || || || || || || |||| || || ||| | | || ||
Sbjct 513 ATTCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAAGAATCTGAAT----CA-- 460
Query 18338 ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATA-CACGGTATACTCTCTATAGCATT 18396
||||||| |||||| || ||| ||| || | | ||| |||| || ||
Sbjct 459 ATCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACT-TCTAATGCGTT 401
Query 18397 AAACAAATCATCTTTTTCT--TTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATAC 18454
|| ||||| |||| ||| || | ||||||| |||||||||||||||||| ||||||
Sbjct 400 GAATAAATCGGCTTTCTCTGCTTCG--TCTTTTACATAAGTGTCGATTAACAAGGAATAC 343
Query 18455 ATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATA-AAACGATCTAGCCTCGGG 18513
|||| || || ||||||| || || |||| ||| ||| || | || || |
Sbjct 342 GTTTCGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGC 283
Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573
|||||| | || | ||| |||| | | ||| ||||| || || ||||| | ||
Sbjct 282 ATATTGCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGC 223
Query 18574 TGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTG---TT 18630
||||||||||| |||| | ||| || || | || ||| | | || | ||| ||
Sbjct 222 GGCGAAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTTATTCAACTTGTTATT 163
Query 18631 CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAA 18679
||| || | || ||||| ||| | ||||| |||||| | ||||| |||
Sbjct 162 CCAGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAAA 114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 727064497503200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |