Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021298.1
Length=51252
Score E
Sequences producing significant alignments: (Bits) Value
seq498792 127 7e-25
seq471061 111 5e-20
seq479375 98.7 3e-16
>seq498792
Length=554
Score = 127 bits (140), Expect = 7e-25
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40522 GCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGT 40581
|||| || || || || ||||| ||||| |||||||| | || ||| ||||| ||||
Sbjct 1 GCATCGATACCCGTTCCGGGTTAAGGAATCGCTCGAACAGCAGGTCGTATTCCAGAGGGT 60
Query 40582 CGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAG 40641
| ||||| || ||| | || ||||| |||||||| ||||| | || || || ||||
Sbjct 61 CAAGGTCAGTAATCTTTTGCACATAGGCCACCAGCGACCCGGCACCCGAACCACGGCCAG 120
Query 40642 GGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGT 40701
| || || |||||||| ||| ||||| |||| |||||| |||| |||||||
Sbjct 121 GACCTACTGGTACGCCGTTACTCTTGGCCCACTGGATAAAGTCCATCACGATCAGGAAGT 180
Query 40702 ACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCG 40739
| |||||| ||||||||||| || || || | ||||
Sbjct 181 AACCCGGGAACCCCATCTGGATAATGATATCCAGCTCG 218
>seq471061
Length=546
Score = 111 bits (122), Expect = 5e-20
Identities = 156/217 (72%), Gaps = 3/217 (1%)
Strand=Plus/Plus
Query 40503 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAG--A 40560
||||| || |||| ||||||||||||||| ||||| ||||| | || |||| || |
Sbjct 60 AAGTCAATATCGAAATCGGGCATGGACACACGCTCAGGGTTTAAAAAGCGCTACAAATAA 119
Query 40561 TGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAAC 40620
| |||| || | | |||||||||||||| || ||| || || || || || |
Sbjct 120 TAAGTC-GTAATGAATAGGGTCGAGGTCGGTAATATTGAGCGAATAAGCAACGAGTGAGC 178
Query 40621 CGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGA 40680
| || |||| || || ||||| ||||| ||||| || | || ||||| ||||| |
Sbjct 179 CTGCACCAGAACCACGACCAGGACCGACTGGTACGCCATTGGCTTTTGCCCAACGGATAA 238
Query 40681 AGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCAT 40717
||||| ||||| ||||||||| || ||||||||
Sbjct 239 AGTCCATGACGATGAGGAAGTAACCAGGAAAGCCCAT 275
>seq479375
Length=664
Score = 98.7 bits (108), Expect = 3e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 40503 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40562
||||||| ||||| |||||||||||| || || || ||||||| ||| || ||||| |
Sbjct 94 AAGTCGACGTCGAAATCGGGCATGGATACACGTTCAGGGTTCAAGAAACGTTCGAACAGT 153
Query 40563 AGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40622
| ||| || || || || | |||||| || || |||| ||||| | ||| ||
Sbjct 154 AAATCGTATTCTAGTGGATCTAAGTCGGTAATTTTAAGCGCGTATGCGACTAACGATCCC 213
Query 40623 GCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAG 40682
|| |||| || || || || || || | |||||| || || |||| | || ||
Sbjct 214 GCACCAGAACCACGGCCGGGACCAACTGGAATGCCGTTGTCTTTGCCCCACTGAATAAAC 273
Query 40683 TCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGG 40721
||| |||| |||||||| ||||| |||||||||
Sbjct 274 TCCATCACGATAAGGAAGTAACCGGGGAAACCCATCTGG 312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162862103741736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |