Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021300.1 Length=43882 Score E Sequences producing significant alignments: (Bits) Value seq272438 98.7 3e-16 >seq272438 Length=1266 Score = 98.7 bits (108), Expect = 3e-16 Identities = 209/306 (68%), Gaps = 11/306 (4%) Strand=Plus/Plus Query 1210 CAACGTGATAACCTACAAGAGCTGGTACAAATGGCTATGACTCACGCCCAAGAGAACCAA 1269 |||||||||||||| ||||| |||| | ||| | ||| ||| |||| ||| Sbjct 662 CAACGTGATAACCTGCAAGAATTGGTTATCTTTGCTTTAGGTCATGCCAAAGACAACGCT 721 Query 1270 GACGAGTTCACACAGCTGTCTCAAGTCATGGCTACTACGGTAGAGATTAAATCATTCCGT 1329 || || || || | | | | ||||| |||| || || || || ||| |||| Sbjct 722 GATGAATTTACTTTGTTAACAAACATCATGCAGGCTACCGTTGAAATAAAGTCAATCCGC 781 Query 1330 ACTGCTACGCTT--AAGGACTACATCAAGGCGCATGTGTCTAACGT--TACTTACACTAA 1385 |||| | | || || |||| ||| |||| ||||| ||||| | || || | ||| Sbjct 782 ACTG--AAGTTTTAAAAGACTTCATAAAGGAACATGTATCTAATATGGTATTTGC--TAA 837 Query 1386 GAACAAAGCTGGTGATTTCATGTTCAAGAAAGAGGTGAAAGGTACGCCATGTGAGTACAA 1445 |||||||||||||| | |||||| || ||||| || ||||| || |||||||||||| Sbjct 838 AAACAAAGCTGGTGAATACATGTTTAAAAAAGATGTTAAAGGCACTGCATGTGAGTACAG 897 Query 1446 GACACTTGAGTCTAAGTGGTACGACTTCGACAGTAAAGG--CCAAGCGT-CTGCTGATAT 1502 | || | |||| ||||| || || ||| ||||| ||| | | ||| ||| || Sbjct 898 TGTAATTAATACTAACTGGTATGATTTTAACAAGAAAGGTAACAATCCTGCTGTTGAAAT 957 Query 1503 TGACGT 1508 ||| || Sbjct 958 TGATGT 963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139425275831856