Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021304.1
Length=51552
Score E
Sequences producing significant alignments: (Bits) Value
seq498792 127 7e-25
seq471061 107 6e-19
seq479375 98.7 3e-16
>seq498792
Length=554
Score = 127 bits (140), Expect = 7e-25
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40810 GCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGT 40869
|||| || || || || ||||| ||||| |||||||| | || ||| ||||| ||||
Sbjct 1 GCATCGATACCCGTTCCGGGTTAAGGAATCGCTCGAACAGCAGGTCGTATTCCAGAGGGT 60
Query 40870 CGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAG 40929
| ||||| || ||| | || ||||| |||||||| ||||| | || || || ||||
Sbjct 61 CAAGGTCAGTAATCTTTTGCACATAGGCCACCAGCGACCCGGCACCCGAACCACGGCCAG 120
Query 40930 GGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGT 40989
| || || |||||||| ||| ||||| |||| |||||| |||| |||||||
Sbjct 121 GACCTACTGGTACGCCGTTACTCTTGGCCCACTGGATAAAGTCCATCACGATCAGGAAGT 180
Query 40990 ACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCG 41027
| |||||| ||||||||||| || || || | ||||
Sbjct 181 AACCCGGGAACCCCATCTGGATAATGATATCCAGCTCG 218
>seq471061
Length=546
Score = 107 bits (118), Expect = 6e-19
Identities = 154/216 (71%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCT-CGAAGAT 40849
||||| || |||| ||||||||||||||| ||||| ||||| | || |||| | || |
Sbjct 60 AAGTCAATATCGAAATCGGGCATGGACACACGCTCAGGGTTTAAAAAGCGCTACAAATAA 119
Query 40850 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40909
| ||| | | |||||||||||||| || ||| || || || || || ||
Sbjct 120 TAAGTCGTAATGAATAGGGTCGAGGTCGGTAATATTGAGCGAATAAGCAACGAGTGAGCC 179
Query 40910 GGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAA 40969
|| |||| || || ||||| ||||| ||||| || | || ||||| ||||| ||
Sbjct 180 TGCACCAGAACCACGACCAGGACCGACTGGTACGCCATTGGCTTTTGCCCAACGGATAAA 239
Query 40970 GTCCGCGACGACGAGGAAGTACGACGGGAAGCCCAT 41005
|||| ||||| ||||||||| || ||||||||
Sbjct 240 GTCCATGACGATGAGGAAGTAACCAGGAAAGCCCAT 275
>seq479375
Length=664
Score = 98.7 bits (108), Expect = 3e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40850
||||||| ||||| |||||||||||| || || || ||||||| ||| || ||||| |
Sbjct 94 AAGTCGACGTCGAAATCGGGCATGGATACACGTTCAGGGTTCAAGAAACGTTCGAACAGT 153
Query 40851 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40910
| ||| || || || || | |||||| || || |||| ||||| | ||| ||
Sbjct 154 AAATCGTATTCTAGTGGATCTAAGTCGGTAATTTTAAGCGCGTATGCGACTAACGATCCC 213
Query 40911 GCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAG 40970
|| |||| || || || || || || | |||||| || || |||| | || ||
Sbjct 214 GCACCAGAACCACGGCCGGGACCAACTGGAATGCCGTTGTCTTTGCCCCACTGAATAAAC 273
Query 40971 TCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGG 41009
||| |||| |||||||| ||||| |||||||||
Sbjct 274 TCCATCACGATAAGGAAGTAACCGGGGAAACCCATCTGG 312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163816113018936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |