Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq498792 127 7e-25 seq471061 107 6e-19 seq479375 98.7 3e-16 >seq498792 Length=554 Score = 127 bits (140), Expect = 7e-25 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40810 GCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGT 40869 |||| || || || || ||||| ||||| |||||||| | || ||| ||||| |||| Sbjct 1 GCATCGATACCCGTTCCGGGTTAAGGAATCGCTCGAACAGCAGGTCGTATTCCAGAGGGT 60 Query 40870 CGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAG 40929 | ||||| || ||| | || ||||| |||||||| ||||| | || || || |||| Sbjct 61 CAAGGTCAGTAATCTTTTGCACATAGGCCACCAGCGACCCGGCACCCGAACCACGGCCAG 120 Query 40930 GGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGT 40989 | || || |||||||| ||| ||||| |||| |||||| |||| ||||||| Sbjct 121 GACCTACTGGTACGCCGTTACTCTTGGCCCACTGGATAAAGTCCATCACGATCAGGAAGT 180 Query 40990 ACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCG 41027 | |||||| ||||||||||| || || || | |||| Sbjct 181 AACCCGGGAACCCCATCTGGATAATGATATCCAGCTCG 218 >seq471061 Length=546 Score = 107 bits (118), Expect = 6e-19 Identities = 154/216 (71%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCT-CGAAGAT 40849 ||||| || |||| ||||||||||||||| ||||| ||||| | || |||| | || | Sbjct 60 AAGTCAATATCGAAATCGGGCATGGACACACGCTCAGGGTTTAAAAAGCGCTACAAATAA 119 Query 40850 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40909 | ||| | | |||||||||||||| || ||| || || || || || || Sbjct 120 TAAGTCGTAATGAATAGGGTCGAGGTCGGTAATATTGAGCGAATAAGCAACGAGTGAGCC 179 Query 40910 GGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAA 40969 || |||| || || ||||| ||||| ||||| || | || ||||| ||||| || Sbjct 180 TGCACCAGAACCACGACCAGGACCGACTGGTACGCCATTGGCTTTTGCCCAACGGATAAA 239 Query 40970 GTCCGCGACGACGAGGAAGTACGACGGGAAGCCCAT 41005 |||| ||||| ||||||||| || |||||||| Sbjct 240 GTCCATGACGATGAGGAAGTAACCAGGAAAGCCCAT 275 >seq479375 Length=664 Score = 98.7 bits (108), Expect = 3e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 40791 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATG 40850 ||||||| ||||| |||||||||||| || || || ||||||| ||| || ||||| | Sbjct 94 AAGTCGACGTCGAAATCGGGCATGGATACACGTTCAGGGTTCAAGAAACGTTCGAACAGT 153 Query 40851 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40910 | ||| || || || || | |||||| || || |||| ||||| | ||| || Sbjct 154 AAATCGTATTCTAGTGGATCTAAGTCGGTAATTTTAAGCGCGTATGCGACTAACGATCCC 213 Query 40911 GCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAG 40970 || |||| || || || || || || | |||||| || || |||| | || || Sbjct 214 GCACCAGAACCACGGCCGGGACCAACTGGAATGCCGTTGTCTTTGCCCCACTGAATAAAC 273 Query 40971 TCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGG 41009 ||| |||| |||||||| ||||| ||||||||| Sbjct 274 TCCATCACGATAAGGAAGTAACCGGGGAAACCCATCTGG 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163816113018936