Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq478780 87.8 5e-12 >seq478780 Length=440 Score = 87.8 bits (96), Expect = 5e-12 Identities = 225/337 (67%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||| |||||||||||||| || || || || | ||| || | | || | | || | | Sbjct 440 ACCTACAGCATCAATTTCATCGATAAAGATGATACAAGGTGCAGATTTTTTAGCTTGTTC 381 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 ||| | || | ||||| ||||| |||| ||| ||| ||||||| ||||| |||||| | Sbjct 380 AAACATATCACGCACACGAGATGCACCAACACCGACAAACATTTCCACAAAATCAGAACC 321 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || | || ||||| || || | ||| || || | ||| |||| || | || || Sbjct 320 TGAAATGGTAAAGAATGGCACCTTAGATTCACCAGCAATAGCCTTCGCTAGTAAGGTTTT 261 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 |||||| || || |||| | | || || || | || | | ||| | | | || Sbjct 260 ACCTGTACCTGGCTGTCCAACCATTAATACGCCAGTAGG-AATACGGCCGC--CTAATTT 204 Query 289269 AT---ATTT-CTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324 | |||| || || | | ||| | || || | ||| | | ||| | |||||| | Sbjct 203 TTGGAATTTAGTCGGGTCAC-GCAAATAATCAACCAGTTCTTTTACTTCTTCTTTTGCTT 145 Query 289325 CATCACATCCTGCTACATCAGCAAAAGTAATATTAAT 289361 ||||||| || || ||||| |||||||| | ||||| Sbjct 144 CATCACAACCAGCGACATCTGCAAAAGTGGTCTTAAT 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1461907860378174