Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq478780 87.8 5e-12
>seq478780
Length=440
Score = 87.8 bits (96), Expect = 5e-12
Identities = 225/337 (67%), Gaps = 8/337 (2%)
Strand=Plus/Minus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
||| |||||||||||||| || || || || | ||| || | | || | | || | |
Sbjct 440 ACCTACAGCATCAATTTCATCGATAAAGATGATACAAGGTGCAGATTTTTTAGCTTGTTC 381
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
||| | || | ||||| ||||| |||| ||| ||| ||||||| ||||| |||||| |
Sbjct 380 AAACATATCACGCACACGAGATGCACCAACACCGACAAACATTTCCACAAAATCAGAACC 321
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| | || ||||| || || | ||| || || | ||| |||| || | || ||
Sbjct 320 TGAAATGGTAAAGAATGGCACCTTAGATTCACCAGCAATAGCCTTCGCTAGTAAGGTTTT 261
Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268
|||||| || || |||| | | || || || | || | | ||| | | | ||
Sbjct 260 ACCTGTACCTGGCTGTCCAACCATTAATACGCCAGTAGG-AATACGGCCGC--CTAATTT 204
Query 289269 AT---ATTT-CTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324
| |||| || || | | ||| | || || | ||| | | ||| | |||||| |
Sbjct 203 TTGGAATTTAGTCGGGTCAC-GCAAATAATCAACCAGTTCTTTTACTTCTTCTTTTGCTT 145
Query 289325 CATCACATCCTGCTACATCAGCAAAAGTAATATTAAT 289361
||||||| || || ||||| |||||||| | |||||
Sbjct 144 CATCACAACCAGCGACATCTGCAAAAGTGGTCTTAAT 108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1461907860378174
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |