Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021337.1 Length=31185 Score E Sequences producing significant alignments: (Bits) Value seq516303 143 5e-30 >seq516303 Length=336 Score = 143 bits (158), Expect = 5e-30 Identities = 221/314 (70%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 20611 TCATGTTTATCATAACCACAACAGTTTGCAACATGAATCTTTAACCATTTAAGTCCTGTT 20670 || ||||||||||||||||| ||||| || |||||| |||||||| |||| || | Sbjct 2 TCGTGTTTATCATAACCACAGCAGTTAGCTACATGAGCTTTTAACCACATAAGACCATCT 61 Query 20671 TTACCTAGAGGTTTACCCTCTGCAAACTCAAGACAACCTTTAATACAATCGTTTGACTGC 20730 ||||||| |||||||||| || ||||||||||||||||| | ||| | |||||| Sbjct 62 GAACCTAGACGTTTACCCTCAGCGAACTCAAGACAACCTTTGACTGAATAG-ATGACTGT 120 Query 20731 GGGTTGATACTACTGCGGAAGTAGAGACGACCTCTCCAATCAATAAACGTTGGAAAATAT 20790 || || | |||| | ||||| | || || | |||||||||||| ||||| || || Sbjct 121 GGATTCAAGTTACTTCTAAAGTACAATCGTCCACGCCAATCAATAAAGGTTGGGAAGTAC 180 Query 20791 AAACGTTCCTCGTCCTGATATTTAACCAACTCTTGAATACGACTTAAGATACCATGTTGA 20850 | | ||||||| ||||| | | |||||| | ||| | |||||| ||| Sbjct 181 AGGGCTACCTCGTCTTGATAACGAGCTAACTCTGTGAGCTTACTCAGGATACCTACATGA 240 Query 20851 CGACCAACACGTTTAGCTTCTTGTGTATACCATGAACTCATTAAACCTTTCCAGAATTGG 20910 ||||| |||||| || || ||||| | |||||| ||||||||| | | Sbjct 241 CGACCCTTACGTTTGTTCTCAGCAGTGTACCAAGCACTCATCTGGGTTTTCCAGAACTTG 300 Query 20911 AACTGATCTAATTC 20924 ||||| || || || Sbjct 301 AACTGTTCCAACTC 314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99048423189828