Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq498792 127 7e-25
seq471061 102 3e-17
seq479375 93.3 1e-14
>seq498792
Length=554
Score = 127 bits (140), Expect = 7e-25
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40270 GCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGT 40329
|||| || || || || ||||| ||||| |||||||| | || ||| ||||| ||||
Sbjct 1 GCATCGATACCCGTTCCGGGTTAAGGAATCGCTCGAACAGCAGGTCGTATTCCAGAGGGT 60
Query 40330 CGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAG 40389
| ||||| || ||| | || ||||| |||||||| ||||| | || || || ||||
Sbjct 61 CAAGGTCAGTAATCTTTTGCACATAGGCCACCAGCGACCCGGCACCCGAACCACGGCCAG 120
Query 40390 GGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGT 40449
| || || || ||||| ||| ||||| |||| |||||| |||| |||||||
Sbjct 121 GACCTACTGGTACGCCGTTACTCTTGGCCCACTGGATAAAGTCCATCACGATCAGGAAGT 180
Query 40450 ACGACGGGAACCCCATCTGGATGATCATGTCGATCTCG 40487
| |||||||||||||||||| || || || | ||||
Sbjct 181 AACCCGGGAACCCCATCTGGATAATGATATCCAGCTCG 218
>seq471061
Length=546
Score = 102 bits (112), Expect = 3e-17
Identities = 144/201 (72%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCT-CGAAGAT 40309
||||| || |||| ||||||||||||||| ||||| ||||| | ||||||| | || |
Sbjct 60 AAGTCAATATCGAAATCGGGCATGGACACACGCTCAGGGTTTAAAAAGCGCTACAAATAA 119
Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369
| ||| | | |||||||||||||| || ||| || || || || || ||
Sbjct 120 TAAGTCGTAATGAATAGGGTCGAGGTCGGTAATATTGAGCGAATAAGCAACGAGTGAGCC 179
Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429
|| |||| || || ||||| ||||| || || || | || ||||| ||||| ||
Sbjct 180 TGCACCAGAACCACGACCAGGACCGACTGGTACGCCATTGGCTTTTGCCCAACGGATAAA 239
Query 40430 GTCCGCGACGACGAGGAAGTA 40450
|||| ||||| |||||||||
Sbjct 240 GTCCATGACGATGAGGAAGTA 260
>seq479375
Length=664
Score = 93.3 bits (102), Expect = 1e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATG 40310
||||||| ||||| |||||||||||| || || || ||||||| ||| || ||||| |
Sbjct 94 AAGTCGACGTCGAAATCGGGCATGGATACACGTTCAGGGTTCAAGAAACGTTCGAACAGT 153
Query 40311 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40370
| ||| || || || || | |||||| || || |||| ||||| | ||| ||
Sbjct 154 AAATCGTATTCTAGTGGATCTAAGTCGGTAATTTTAAGCGCGTATGCGACTAACGATCCC 213
Query 40371 GCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAG 40430
|| |||| || || || || || || | ||||| || || |||| | || ||
Sbjct 214 GCACCAGAACCACGGCCGGGACCAACTGGAATGCCGTTGTCTTTGCCCCACTGAATAAAC 273
Query 40431 TCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGG 40469
||| |||| |||||||| ||||| |||||||||
Sbjct 274 TCCATCACGATAAGGAAGTAACCGGGGAAACCCATCTGG 312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162305598330036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |