Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq498792 127 7e-25 seq471061 102 3e-17 seq479375 93.3 1e-14 >seq498792 Length=554 Score = 127 bits (140), Expect = 7e-25 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40270 GCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGT 40329 |||| || || || || ||||| ||||| |||||||| | || ||| ||||| |||| Sbjct 1 GCATCGATACCCGTTCCGGGTTAAGGAATCGCTCGAACAGCAGGTCGTATTCCAGAGGGT 60 Query 40330 CGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAG 40389 | ||||| || ||| | || ||||| |||||||| ||||| | || || || |||| Sbjct 61 CAAGGTCAGTAATCTTTTGCACATAGGCCACCAGCGACCCGGCACCCGAACCACGGCCAG 120 Query 40390 GGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGT 40449 | || || || ||||| ||| ||||| |||| |||||| |||| ||||||| Sbjct 121 GACCTACTGGTACGCCGTTACTCTTGGCCCACTGGATAAAGTCCATCACGATCAGGAAGT 180 Query 40450 ACGACGGGAACCCCATCTGGATGATCATGTCGATCTCG 40487 | |||||||||||||||||| || || || | |||| Sbjct 181 AACCCGGGAACCCCATCTGGATAATGATATCCAGCTCG 218 >seq471061 Length=546 Score = 102 bits (112), Expect = 3e-17 Identities = 144/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCT-CGAAGAT 40309 ||||| || |||| ||||||||||||||| ||||| ||||| | ||||||| | || | Sbjct 60 AAGTCAATATCGAAATCGGGCATGGACACACGCTCAGGGTTTAAAAAGCGCTACAAATAA 119 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369 | ||| | | |||||||||||||| || ||| || || || || || || Sbjct 120 TAAGTCGTAATGAATAGGGTCGAGGTCGGTAATATTGAGCGAATAAGCAACGAGTGAGCC 179 Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429 || |||| || || ||||| ||||| || || || | || ||||| ||||| || Sbjct 180 TGCACCAGAACCACGACCAGGACCGACTGGTACGCCATTGGCTTTTGCCCAACGGATAAA 239 Query 40430 GTCCGCGACGACGAGGAAGTA 40450 |||| ||||| ||||||||| Sbjct 240 GTCCATGACGATGAGGAAGTA 260 >seq479375 Length=664 Score = 93.3 bits (102), Expect = 1e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATG 40310 ||||||| ||||| |||||||||||| || || || ||||||| ||| || ||||| | Sbjct 94 AAGTCGACGTCGAAATCGGGCATGGATACACGTTCAGGGTTCAAGAAACGTTCGAACAGT 153 Query 40311 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40370 | ||| || || || || | |||||| || || |||| ||||| | ||| || Sbjct 154 AAATCGTATTCTAGTGGATCTAAGTCGGTAATTTTAAGCGCGTATGCGACTAACGATCCC 213 Query 40371 GCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAG 40430 || |||| || || || || || || | ||||| || || |||| | || || Sbjct 214 GCACCAGAACCACGGCCGGGACCAACTGGAATGCCGTTGTCTTTGCCCCACTGAATAAAC 273 Query 40431 TCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGG 40469 ||| |||| |||||||| ||||| ||||||||| Sbjct 274 TCCATCACGATAAGGAAGTAACCGGGGAAACCCATCTGG 312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162305598330036