Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021344.2
Length=176227
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 197 2e-45
seq508109 113 5e-20
seq128994 111 2e-19
>seq449735
Length=3187
Score = 197 bits (218), Expect = 2e-45
Identities = 322/463 (70%), Gaps = 3/463 (1%)
Strand=Plus/Plus
Query 41652 TACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAG 41711
|||||||||| |||||||| ||||| ||||| || || || |||||| | || |||
Sbjct 35 TACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGCTCGTGTGTAT 94
Query 41712 TGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTGAAGT 41771
| || || | || || || | ||| | || || | ||||| || || || |
Sbjct 95 TAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCAATTGTTAAAT 154
Query 41772 ATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGACATATTCGCGCGATGGGTTCTA 41831
| | || |||||||| || || || | ||||| || | ||||| || |||||
Sbjct 155 ACGTATCGCAACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGCACTGGGTAGCC 214
Query 41832 AAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATCCCGTTCTGGAAACATATTCAGA 41891
| || || ||| ||||| ||||| || || || || | || || |||| |
Sbjct 215 ACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATAAGCACTTTCAAA 274
Query 41892 CAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTATTATC 41951
||||||||||| |||||| ||||| ||||| ||||| || || ||||| |||| || |
Sbjct 275 CAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAACCTTGTTCTACC 334
Query 41952 CGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAAA 42011
|| | |||||||| ||||| ||||||||| | || || ||||| ||| || |||||
Sbjct 335 CGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACCGCGGGGTTGATG 394
Query 42012 ACAACCGTATCCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGATGTATAAACGTT 42071
||||||| | ||||| | ||||| ||||||||| |||| | | ||||| ||||
Sbjct 395 ACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAATGTACTCGCGTT 454
Query 42072 TGATGAATAACGATTACATCACTCTGTTCAGCC---CTGATGT 42111
| || || |||| ||||| || |||| |||| |||||||
Sbjct 455 TAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCTGATGT 497
>seq508109
Length=334
Score = 113 bits (124), Expect = 5e-20
Identities = 210/306 (69%), Gaps = 2/306 (1%)
Strand=Plus/Minus
Query 89645 CCACGTCCCTTTTGTTTCAGACCCAGGAACACGATCGCGTTGACTTGTTTCAGGCGCGGA 89704
|| || |||||||| |||| | |||||| || || || || | | || ||
Sbjct 305 CCGCGACCCTTTTGCTTCAATGATAAGAACACAATAGCATTTACATTAGCTAATCGTGGG 246
Query 89705 TCATTACGCACAGCATCAACAACGGTAAACGCATCATCA-TAGGTCTTTGAGCTAACCAT 89763
||| | || ||| ||| || ||| ||||||| ||| ||| | | || | |||
Sbjct 245 TCAGTTTTCATAGCTTCAGTTACAGTATACGCATCTTCAATAGTACGACCA-CTGATCAT 187
Query 89764 GAAATGTAGGTTGATTTGCTGTTGTCCTGCTTCTGCCAGGTTTGCGACGGAATCGAAAGC 89823
|| |||||||||||||||| ||| || || | | | || || || || ||
Sbjct 186 AAAGTGTAGGTTGATTTGCTTTTGACCAGCAGCGGTTAAACGCGCAACACTGTCAAACGC 127
Query 89824 AACATCGAAGCCAGCATGTTTATAAACCGATACTGCAACAGCCCCAGCAACCGCCGCTAA 89883
||||| || ||||| ||||||||||| ||||| |||| ||| |||||||| | |||||
Sbjct 126 TACATCAAAACCAGCGTGTTTATAAACTGATACAGCAATAGCACCAGCAACTGATGCTAA 67
Query 89884 ACGCGCTGCAACGTCTTTTGATACATCAGCAATGGTAAGGTTCGGTACAATGCCTTTAGA 89943
|| ||||| |||| ||| ||||||||||| || || || || | ||| |||| ||
Sbjct 66 TTTAGCAGCAACTTCTTCTGACACATCAGCAATTGTTAGATTTGGGATAATACCTTGTGA 7
Query 89944 ACGCGC 89949
||| ||
Sbjct 6 ACGAGC 1
>seq128994
Length=861
Score = 111 bits (122), Expect = 2e-19
Identities = 204/297 (69%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 43937 TATCTGTGTATGCACGCTGTCAACGCTCTGGAAGCGATTCGTTTCTATGTCTCGTTTACC 43996
||| |||| ||| | ||||| || | ||||||||||| ||||||||| ||| ||
Sbjct 472 TATTTGTGCATGATGTCAGTCAATGCCTTAGAAGCGATTCGCTTCTATGTCAGTTTTGCC 413
Query 43997 TTTACGTTCAACTTTGCCGAACAGGGCAAGATGGAAGGTAACGCAAAGATCATGCGTCTG 44056
| | |||| |||||| |||| | ||||||||||| || || || || || |
Sbjct 412 TGTTCGTTTGCCTTTGCTGAACGTCGTGTTATGGAAGGTAATGCTAAAATTATTCGCTTA 353
Query 44057 ATTGCCCGTGATGAAGCACTTCATCAGAAAGGTACTCAAAGCAAGATCCGACTCTG--GC 44114
||||||||||||||||| | || | || |||| ||| || | ||||| ||
Sbjct 352 ATTGCCCGTGATGAAGCCTTACACCTCAATAGTACACAA--CACATTTTAGCTCTGATGC 295
Query 44115 AGATGGGTAAAGATGACCCAGAAATGGCAGAAATCGCGTATCAGTACGAAGAAGAAGCAA 44174
|| |||||||| ||||||||||||| |||||| || | ||| | |||||||
Sbjct 294 AGGGTGGTAAAGACGACCCAGAAATGGGAGAAATTGCTGCTGAGTGTAAGCAAGAAGCGT 235
Query 44175 CACAGATTTTCCTCGAAGTTTACGAGCAGGAAAAAGAATGGGCTGAACACTTATTCA 44231
| | ||| || ||| || || |||||||||||||| | |||||||||
Sbjct 234 ATGACTTATTCGTCAAAGCGGCGGAACAAGAAAAAGAATGGGCCAAGTACTTATTCA 178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560094935165040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |