Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 158 2e-33
seq509673 120 5e-22
seq516580 114 2e-20
seq250551 105 1e-17
seq496347 93.3 7e-14
seq511105 86.0 1e-11
>seq449735
Length=3187
Score = 158 bits (174), Expect = 2e-33
Identities = 591/917 (64%), Gaps = 51/917 (6%)
Strand=Plus/Plus
Query 63672 AAACTTTCTTTACCAACCCCGATCATGGCAGGTGTTCGTACGCCAACTCGACAATTTAGC 63731
||| |||| |||| || || || ||||||||||||||||||||||| || || ||||||
Sbjct 25 AAAATTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGC 84
Query 63732 TCATGTGTTAAAATCGAATCTGGCGACTCTCTGCATTCAGTCAACA--AAGTAGCCGAAG 63789
|| ||||| ||| || | ||||||| || ||||| | ||| | | | | |
Sbjct 85 TCGTGTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCT--G 142
Query 63790 CAATCATCAACTA--TATCAGTAAACGTGCTGGTATCGGTGTTAATGGCGGTGCTATTCG 63847
|||| | || || |||| ||||||| || || || |||| | ||| |||||
Sbjct 143 CAATTGTTAAATACGTATCGC--AACGTGCCGGCATTGGCATTAACGCAGGTCGCATTCG 200
Query 63848 TGCTGAAGGCTCGGTTG-----TTCGAGCAGGTGAAATTCGACACACTGGTGTAATCCCA 63902
||| || ||| | |||| || ||| || || ||| || ||
Sbjct 201 TGCA-----CTGGGTAGCCACATTCGCAATGGCGAAGCGTACCATACGGGTTGTATTCCT 255
Query 63903 TTCTGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGTGGTGGT 63962
|| | || |||||||| || || || || ||||| ||||| ||||| ||||| ||
Sbjct 256 TTTTATAAGCACTTTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGC 315
Query 63963 GCTGCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTGCTGAAG 64022
|| ||||| | |||||| |||||||||||||||| ||||| || || || || ||
Sbjct 316 GCAGCAACCTTGTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAA 375
Query 64023 AACAACAAAGGCGTTGAAGAAAACCGTATTCGTCATCTTGACTACAGTGT---GTCTATC 64079
|| ||| || ||||| || ||||| | |||||| | || ||| | || || ||
Sbjct 376 AATAACCGCGGGGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAAT 435
Query 64080 AGTCGCTTGATGATGCAACGTCTAGCAACAAATGATTACATCACGTTGTTTAGCCCAGAT 64139
| | | ||| ||| || | | | || ||||| || ||||||||||| |
Sbjct 436 AAAC---TAATGTACTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCCCTCT 492
Query 64140 GAACGTAATGGCGCACTTTATGGTGAATATCACACGAACCCTGAGAAGTTCGAAGAGCTT 64199
|| ||| ||||| | || || | ||| || |||| || | ||||
Sbjct 493 GATGTGCCAGGC---CTTTACGATGCATTTTTTGAAGACCAAGACGAGTTTGACGCGCTT 549
Query 64200 TATCTAGAACTCGAAGCTGACCCGACAGTTCGTAAGAAGCGTATCAAAGCTACTGAGTTA 64259
||| || || |||| ||| || ||||||| || || || ||||||| ||| |
Sbjct 550 TATGTAAAATACGAACAAGACGAATCAATTCGTAAAAAACGCATTAAAGCTATTGAACTG 609
Query 64260 TTCAGCATGTTTTGTCAAGAGCGTACAAGTACAGGTCGAATCTAC---CCGATCTTTGTT 64316
||| |||||| ||||| ||| ||||||| ||||| || ||| | | | |||
Sbjct 610 TTCTCAATGTTTGCGCAAGAACGTGCAAGTACCGGTCGTATTTACTTACAAAAC---GTT 666
Query 64317 GACAACTTGAACTCTCAATCGCCATACATCG---AAG------CTATCAAGCAATCGAAC 64367
||| ||| || | || || | ||| | ||| |||| ||||| ||
Sbjct 667 GACCACTGTAATACGCACAGCCCGTTCATTGCTAAAGTGGCACCTATTCGCCAATCTAAT 726
Query 64368 TTGTGTATGGAAATCGCGTTACCGACGTACCCACTTGGTA--GT----GCTGATGAA--- 64418
|| ||| | ||||| || ||||| || | || | | || || | || |||
Sbjct 727 TTATGTTTAGAAATTGCATTACCAACTAAGCCGTTGGATAACGTAAACGACGAAGAAGGC 786
Query 64419 GAGATCGCACTTTGTACACTTGCTGCTTACAACTTAGGCGCAATGGAATCTGCAAGTGAA 64478
|| || || || |||||||| |||| | |||||||| || || || || | ||||
Sbjct 787 GAAATTGCGCTATGTACACTCTCTGCATTTAACTTAGGGGCTATTGAGTCACTAGATGAA 846
Query 64479 TTTGCACATCTAGCACCGATTGTTATGCGTGCGTTAGATAACTTGCTTGATTATCAAGAT 64538
||| | | | || | ||| | | || || ||||||||||| ||||||| ||||||
Sbjct 847 CTTGAAGAATTGGCTGAGCTTGCTGTACGCGCTTTAGATAACTTACTTGATTTTCAAGAC 906
Query 64539 TATCCTGTTGCTGCTGC 64555
|| || || | |||||
Sbjct 907 TACCCAGTACCGGCTGC 923
>seq509673
Length=441
Score = 120 bits (132), Expect = 5e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 63897 ATCCCATTCTGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGT 63956
|||||||||| |||| || || |||||||| || | || |||||||| || || |||
Sbjct 406 ATCCCATTCTATAAACTGTTCCAAACTGCTGTTAAATGCTGCTCACAAGGCGGCGTCCGT 347
Query 63957 GGTGGTGCTGCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTG 64016
|| ||||| || ||| | |||||| | ||||||||||||||||| | | |||||
Sbjct 346 GGCGGTGCAGCGACGTTGTTTTACCCATTATGGCATTTAGAAGTTGAGTCATTATTGGTA 287
Query 64017 CTGAAGAACAACAAAGGCGTTGAAGAAAACCGTATTCGTCATCTTGACTAC 64067
||||| || ||| ||||| ||||| |||||| | |||||| | || |||
Sbjct 286 CTGAAAAATAACCGCGGCGTGGAAGACAACCGTGTCCGTCATATGGATTAC 236
>seq516580
Length=413
Score = 114 bits (126), Expect = 2e-20
Identities = 142/194 (73%), Gaps = 3/194 (2%)
Strand=Plus/Minus
Query 172663 TACGGCATTAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTG 172722
|||| ||| || || | ||| ||||||| || | ||||| |||||||||||||| |||
Sbjct 301 TACGACATCAAACAGTTAGCAGTTGAATGTGCTACCAAGCGTATGTATCCAGATATTTTG 242
Query 172723 AGCTATGAAAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCGTTCA 172782
| ||| || ||| |||| ||||| ||||| ||||| |||| || ||||| |||||||||
Sbjct 241 AACTACGACAAGTTAGTTGAAACTACTGGTGGGTTCAAGTACCCAATGGGCTGTCGTTCA 182
Query 172783 TTCTTAGGCGACTGGAAAAAC---GAAGATGGTGAAACTGTATTCGACGGTCGAAACAAT 172839
||| || ||| ||| | || | | |||||| | |||| || || || || ||
Sbjct 181 TTCCTACACGAATGGTCAGACCCAGTAACAGGTGAACCAGTATATGATGGACGTAATAAC 122
Query 172840 CTAGGCGTTGTCTC 172853
| || ||||| ||
Sbjct 121 TTGGGTGTTGTATC 108
>seq250551
Length=853
Score = 105 bits (116), Expect = 1e-17
Identities = 234/351 (67%), Gaps = 0/351 (0%)
Strand=Plus/Plus
Query 173212 ACTGACGCATGGAAAGAACTGACTGGTTACGGATTTAGTCTGTACAGCACACCAAGCGAA 173271
||||| | |||||| || || ||||| || |||||| | ||||| || ||||| |||
Sbjct 272 ACTGAGTCTTGGAAACAAGAAACAGGTTATGGCTTTAGTTTATACAGTACCCCAAGTGAA 331
Query 173272 TCGCTATGTGATCGTTTCTGTCGTCTTGATCAAGAGAAGTACGGTATCATTACTGGTATC 173331
|||| ||||| || | || ||| ||| || | | | ||| |
Sbjct 332 AACTTATGCAGCCGTTTTTGCCAGCTAGATACCACCCAGTTTGGCGTTGTGGCAGGTGTG 391
Query 173332 AATGACAAAGACTACTATACAAACTCGTTCCACTTAGACGTATTCAAGAAAGTGAATCCG 173391
| ||||||| ||| || || || ||||||||||| || |||||||| |||||
Sbjct 392 ACCGACAAAGGCTATTACACCAATAGCTTCCACTTAGATGTTGAAAAGAAAGTAAATCCT 451
Query 173392 TTCGAGAAGATTGACTTTGAAGCATCGTACCCAGCATATGCAAACGGCGGTTTCATTTGC 173451
|| || |||||||| |||||| | | || ||||| || || ||||| || |||||
Sbjct 452 TTTGATAAGATTGATTTTGAACAACCTTATCCAGCCATCGCCAATGGCGGGTTTATTTGT 511
Query 173452 TATGCAGAGTTCCCGAACATGCGCGACAATATCAAAGGTCTAGAACGTGTATGGGATTAT 173511
|| | || | || ||||||| ||||||| ||| || ||| || ||||||||
Sbjct 512 TACGGCGAATATCCCAACATGCAGCACAATATTGAAGCGCTCGAAAACGTTTGGGATTAC 571
Query 173512 GCTCATAGCAAAGTTGCTTACTTCGGTACAAACACACCGATTGATCAATGT 173562
| ||||| ||| | || | ||| || || || || |||||| | |||
Sbjct 572 AGTTATAGCCGAGTGCCATATTACGGCACCAATACTCCCATTGATGAGTGT 622
>seq496347
Length=416
Score = 93.3 bits (102), Expect = 7e-14
Identities = 108/144 (75%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 65884 AAGCACTTTACTTGTGTATGCACGCAGTAAACGCGCTTGAAGCAATTCGTTTCTATGTTT 65943
|||| || ||||||||||||||||| || ||||| | ||||||||||| ||||| ||||
Sbjct 270 AAGCCCTATACTTGTGTATGCACGCTGTTAACGCTTTAGAAGCAATTCGATTCTACGTTT 329
Query 65944 CATTTGCATGTACTTTCAACTTTGCTGAA--CAAGGCATCATGGAAGGCAACGCGAAAGT 66001
| ||||| ||||||| |||| ||| |||| || ||||||||| || ||
Sbjct 330 CCTTTGCTATTACTTTCTCTTTTGGGGAACGCAAG--ATTATGGAAGGCGTAGCCAAGAC 387
Query 66002 AATGAAACTGATTGCACGTGATGA 66025
||| ||| |||||||| || ||
Sbjct 388 AATCGCACTAATTGCACGCGACGA 411
>seq511105
Length=248
Score = 86.0 bits (94), Expect = 1e-11
Identities = 142/201 (71%), Gaps = 3/201 (1%)
Strand=Plus/Minus
Query 65907 GCAGTAAACGCGCTTGAAGCAATTCGTTTCTATGTTTCATTTGCATGTACTTTCAACTTT 65966
||||| |||| | ||||| ||||| || |||| |||||||| || | || ||
Sbjct 212 GCAGTCAACGTCTTAGAAGCGATTCGCTTTTATGCCTCATTTGCCTGCTCGTTTGCGTTC 153
Query 65967 GCTGAACAAGGCATCATGGAAGGCAACGCGAAAGTAATGAAACTGATTGCACGTGATGAG 66026
||||| | | | |||||||| ||||| ||| | || || || ||||| |||||||||
Sbjct 152 GCTGAGCGTAAC-TGATGGAAGGTAACGCCAAAATTATCAAGCTCATTGCGCGTGATGAG 94
Query 66027 CAGCTTCACTTGAAAGGCACACAAGCGT-TAATCAATATCTGGCACTCTGGTAAAGATGA 66085
||| || || | ||||| || || | | ||||| | || ||||| || ||
Sbjct 93 GCGCTACATTTAACCGGCACGCA-GCATATGCTCAATCTTATGCGTAACGGTAAGGACGA 35
Query 66086 TCCAGAAATGGTAGAAATTGC 66106
|||||| ||||||||||||||
Sbjct 34 TCCAGAGATGGTAGAAATTGC 14
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786705339782320
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