Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq509954 149 7e-31 >seq509954 Length=433 Score = 149 bits (164), Expect = 7e-31 Identities = 243/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Plus Query 110253 TTGCTCAGGACCTTAAGGCAATTCATGGTTTGGATGCCGAGCAAGAGCTCGCCAACATCC 110312 |||||||||| | || || | ||||| ||||| || || |||| || || || || | Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60 Query 110313 TCAGCACAGAAATCCTTGCTGAAATCAACCGTGAAGTTGTACGTACAATCTACGTAAACG 110372 | || ||||| ||||| ||||| |||||||| | | ||||| | || | || | Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120 Query 110373 CTGTTGCTGGTGCTCAGAACAATACCGCTAACGCTGGTATCTTTGACCTTGACGTTGATT 110432 | ||||||| || | | | || |||||||||||||| || | ||||| ||| Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180 Query 110433 CCAACGGCAGATGGTCGGTTGAGAAGTTCAAAGGACTTCTTTTCCAAATCGAAAGAGATG 110492 | || || | ||||| || || || |||||||||||| | |||||||| ||| | |||| Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240 Query 110493 CTAACGCTATTGGTCAGCAAACTCGTCGTGGCAAGGGCAACGTCCTGATCTGCTCCGCCG 110552 ||||| || | | | |||| | ||||| || || ||| | | ||||| || | | Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300 Query 110553 ACGTTGCTTCTGCACTGGGCATGGCTGGTGTTCTTGACTACACCCCTGCT 110602 |||| ||||||||| ||| ||||| | ||||| | | | |||||| Sbjct 301 ACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCT 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544772251950640