Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 178 1e-39
seq489705 89.7 6e-13
>seq509954
Length=433
Score = 178 bits (196), Expect = 1e-39
Identities = 232/320 (73%), Gaps = 1/320 (0%)
Strand=Plus/Plus
Query 102564 TTGCTCAAGACCTGAAGGCGATTCATGGTTTGGATGCTGAGCAAGAGCTCGCAAACATCC 102623
||||||| || |||| || | ||||| ||||| || || |||| || ||||| || |
Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60
Query 102624 TCAGCACTGAAATCCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCATCTACGTAAACG 102683
| |||||||| ||||| ||||| |||||||| | |||||||| | || | || |
Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120
Query 102684 CTGTTGCTGGTGCTCAGAACAACACTGCTAACGCTGGTATCTTCGACCTCGACGTTGACT 102743
| ||||||| || | | || ||||||||||||||||| | ||||| ||
Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180
Query 102744 CCAACGGTCGCTGGTCTGTTGAGAAGTTCAAGGGTCTGCTGTTCCAAATCGAGCGCGATG 102803
| || ||||||||||| || || || ||||| || || |||||||||| || || ||||
Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240
Query 102804 CAAACGCAATCGGTCAGCAAACTCGTCGTGGCAAGGGTAACATCCTGATCTGCTCCGCTG 102863
| ||| ||||| | | |||| | ||||| || |||||| | | ||||| || |||
Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300
Query 102864 ACGTTGCTTCTGCACTTGGC 102883
|||| ||||||||| |||||
Sbjct 301 ACGTAGCTTCTGCA-TTGGC 319
>seq489705
Length=338
Score = 89.7 bits (98), Expect = 6e-13
Identities = 68/78 (87%), Gaps = 2/78 (3%)
Strand=Plus/Minus
Query 148128 TTACGGGGTGTAGCTTAGCTTGGTAGAGCGCCC-GCTTTGGGAGCGGGAGGTCGCAGGTT 148186
|||||||||||||| ||||| ||| | ||| | |||||||||| || ||||||||||||
Sbjct 218 TTACGGGGTGTAGCGTAGCTCGGTT-ATCGCGCTGCTTTGGGAGGGGAAGGTCGCAGGTT 160
Query 148187 CAAATCCTGCCACCCCGA 148204
| ||||||||||||||||
Sbjct 159 CGAATCCTGCCACCCCGA 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546012054119440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |