Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021561.1
Length=37324
Score E
Sequences producing significant alignments: (Bits) Value
seq491877 206 6e-49
seq517215 168 2e-37
seq520781 136 9e-28
>seq491877
Length=500
Score = 206 bits (228), Expect = 6e-49
Identities = 349/502 (70%), Gaps = 5/502 (1%)
Strand=Plus/Plus
Query 31966 TCACGCGCTGCGATTGGCCTGAACTCTGAGCTAATCGAAGGTGACTTGAAGCTACGCTCG 32025
|| |||| ||| ||||| | || || || | | || |||||||| ||||| ||
Sbjct 1 TCGCGCGGTGCAATTGGTTTAAATTCAGAAATGGTTGAGGGTGACTTAAAGCTTAAGTCT 60
Query 32026 TTCTACAAAGTGGGCGGCTCTATCGCTGACCGTGATGTGAATTCAACGGCTACCGTTGCA 32085
|| |||||| | ||||||||||| || ||| |||| || ||| || | ||| ||
Sbjct 61 TTTTACAAACTTGGCGGCTCTATTGCGTCACGTAATGTTAACTCAGTTGCAGCAGTTACA 120
Query 32086 GGTATTAAGATTGCAGCGGATGAAATGGTATCAGTGAAAGTGCCTTGGAAATACGGCCCA 32145
|| || || | ||| || ||| || || || || |||||||||||||||
Sbjct 121 GGCTCAAAAATCGGTATGGACGAGCAGGTGTCTGTTAAGTCACCGTGGAAATACGGCCCA 180
Query 32146 TACGAAACCACAGAAGAAGCGTTTAAGCGTCGCGCACGTTCGCCTGAGGAATTCTCTGAA 32205
|||||||| || |||||||| ||||||||||||| | |||| || || ||
Sbjct 181 TACGAAACAACTGAAGAAGCATTTAAGCGTCGCGGCAAAACTCCTGCTGAGTTTTCAATG 240
Query 32206 ATCATCGGTCAAGACATGGCAGACGCTACAATGTCAGGTTGGATTGGTTACGCATTGAAT 32265
| ||||||||||| |||| || || | |||||| ||| ||||||| | |
Sbjct 241 TTAATCGGTCAAGATATGGGTGATGCCGTTCTTGATGGTTGGGTTGATTACGCACTAGCT 300
Query 32266 GCACTACAAGGCGCAATCGGCTCTAACGCCGGCATGAACGTATCTGGCGAGCTTGCAACT 32325
||| |||| || | ||| | ||| | | ||||| ||| | ||||| || |||||
Sbjct 301 GCATTACAGGGTTCTATCAAAACAAACTCTGACATGATTGTAACAGGCGACCTAGCAACA 360
Query 32326 GAAGGTAAGAAAGTTCTTACCAAAGGTTTGCGCACAATGGGCGACAAAGCATCATCTA-- 32383
|||||||| || ||||| |||||||| || ||||| || |||||||| || | |
Sbjct 361 GAAGGTAAAAAGGTTCTAACCAAAGGCTTACGCACTAT-GGCGACAA--GTTCGGCCAAG 417
Query 32384 TCGCAATCTGGGTGATGGATTCAACGTCTTACTTTGACATCGTTGACGAGGCGATTGACA 32443
| || |||||||| ||||| || | || ||||| |||||||||||| | || || |
Sbjct 418 TTGCTATCTGGGTTATGGACTCTGCTTCATACTTCGACATCGTTGACCAAGCTATCAGCG 477
Query 32444 ACAAGCTTTATGAAGAAGCTGG 32465
| ||| ||||||||||||||||
Sbjct 478 AAAAGATTTATGAAGAAGCTGG 499
>seq517215
Length=535
Score = 168 bits (186), Expect = 2e-37
Identities = 188/250 (75%), Gaps = 1/250 (0%)
Strand=Plus/Plus
Query 35998 TTTTTCTCCATATCCACTCATGCTTAAATTGCTTTATATTGCTGCTAACCAGCACACTAG 36057
|||||| | ||| ||| || ||||| ||| ||||| | || ||||| |||
Sbjct 61 TTTTTCCCAATA-CCAGCAATATTTAAACATCTTCATATTTGAACCAATAAGCACTGTAG 119
Query 36058 TGAACGGCTGTGAGGCTGTCATAACTATCGCGCAATTAGGCTTAATAATGCGCTTCAACT 36117
|||| ||||| || ||||||||||| |||| ||||||||| ||||| || || ||||
Sbjct 120 TGAAAGGCTGACTAGCAGTCATAACTATAGCGCCATTAGGCTTTATAATTCGTTTTAACT 179
Query 36118 GCTCCCACATTGGTTCCAATGGGATAATAGAGTCCCACTTGCATGCTGTAGTTCCATATG 36177
| |||||||| ||||| | || |||| || ||||||||||| ||||| || ||||| |
Sbjct 180 GTTCCCACATCGGTTCAAGAGGAATAACTGAATCCCACTTGCACGCTGTTGTGCCATAAG 239
Query 36178 GCGGATCAGTCAAAATCATATCCACACTACCGCTTTCAATTTCTTTCATTCGCTCTAGGC 36237
||||||||||||| |||||||| || |||| | || |||||||| ||||| ||||
Sbjct 240 GCGGATCAGTCAATATCATATCAACCGAACCGTCTGGGATCTCTTTCATACGCTCAAGGC 299
Query 36238 AGTCGCCCTG 36247
| || || ||
Sbjct 300 AATCTCCGTG 309
>seq520781
Length=281
Score = 136 bits (150), Expect = 9e-28
Identities = 149/197 (76%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 36057 GTGAACGGCTGTGAGGCTGTCATAACTATCGCGCAATTAGGCTTAATAATGCGCTTCAAC 36116
|| || ||||| || ||||||||||| || || | |||||| ||||| || ||||||||
Sbjct 194 GTAAAAGGCTGCGAAGCTGTCATAACAATAGCACCATTAGGTTTAATGATACGCTTCAAT 135
Query 36117 TGCTCCCACATTGGTTCCAATGGGATAATAGAGTCCCACTTGCATGCTGTAGTTCCATAT 36176
|| ||||||||| || || |||| || ||||||||||| |||||||| ||||||
Sbjct 134 TGGTCCCACATTAAATCTAAATCAATAACTGAATCCCACTTGCAAGCTGTAGTGCCATAT 75
Query 36177 GGCGGATCAGTCAAAATCATATCCACACTACCGCTTTCA---ATTTCTTTCATTCGCTCT 36233
|| || || ||||| |||||| || || | ||| ||||||||||||||||||
Sbjct 74 GGAGGGTCTGTCAATATCATAGAAAC---GCCTCCATCAGGGATTTCTTTCATTCGCTCT 18
Query 36234 AGGCAGTCGCCCTGCAT 36250
| ||| || || | |||
Sbjct 17 AAGCAATCACCTTTCAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118570633032264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |