Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021867.1
Length=46978
Score E
Sequences producing significant alignments: (Bits) Value
seq514343 286 1e-72
seq499631 134 4e-27
>seq514343
Length=433
Score = 286 bits (316), Expect = 1e-72
Identities = 224/268 (84%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 39903 ACATCTGTAAAATAAAATTCTGCGTAAGCTATTTGCCATAACAGAAAATTACTAATGCGG 39962
|| || ||||| || ||||||||||||||||||||||| | |||||||||||| || ||
Sbjct 270 ACTTCGGTAAAGTATAATTCTGCGTAAGCTATTTGCCACAGCAGAAAATTACTGATTCGA 211
Query 39963 TGTTCGCCACTTGTTCTTATTACTAAATCTACATCAGGTAGATTATGCGTGTAAAGATGC 40022
||||||||||| |||| ||||| ||||||||| ||||||| ||| |||||||||||||||
Sbjct 210 TGTTCGCCACTGGTTCGTATTAATAAATCTACGTCAGGTAAATTTTGCGTGTAAAGATGC 151
Query 40023 TTATTTAATATTGAATCGTCAATAGAATCTATTGAAATTATATTATTTTTAACTTTATCA 40082
| ||||| |||| ||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 150 TCATTTATAATTGCATCGTCAATAGCGTCAATTGAAATTATATTATTTTTAACTTTGTCG 91
Query 40083 CTAATTATTTTAACAGCATTTATGATTTCTTCTCTCGATCCGTAGCTTAATGCTAAGGTA 40142
|| || || ||| |||| | ||||||||||| |||||||||||||||||||| ||
Sbjct 90 CTTATAGACTTCACAACATTAACAATTTCTTCTCTAGATCCGTAGCTTAATGCTAAAGTT 31
Query 40143 AGGGTCATTCTGGTATTGTTTTTTGTTT 40170
| || | | | ||||||||||| ||||
Sbjct 30 AATGTGAGTTTCGTATTGTTTTTAGTTT 3
>seq499631
Length=253
Score = 134 bits (148), Expect = 4e-27
Identities = 131/169 (78%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 35683 AAGCTGTGCAAAATCCATGGAGGTCTAATACTCTTGAGTGGACTACACCAGTGGAACATG 35742
|||| | || |||||||||| | | |||| | || |||||||| ||||| |||||
Sbjct 252 AAGCAATTCAGAATCCATGGAAAGCAACTACTTTAGAATGGACTACTCCAGTAGAACACA 193
Query 35743 TACATGGAAACTGGCCAGGTGCTATCCCAGAAGTTTATAGATGGCCTTATGATTACAGTA 35802
| || ||||||||||| |||||||| || ||||| || |||||||| ||||||||||| |
Sbjct 192 TTCACGGAAACTGGCCTGGTGCTATTCCTGAAGTGTACAGATGGCCATATGATTACAGCA 133
Query 35803 AACCAGGGCATGACGAAGATTTTGTTCCTCAAACTGTGCCAATGAAAGA 35851
||||||| || | |||||||| || |||| || |||||||| ||
Sbjct 132 AACCAGGTTGGGATGTTGATTTTGTACCGCAAAACGTTCCAATGAAGGA 84
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149270651572560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |