Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_021867.1 Length=46978 Score E Sequences producing significant alignments: (Bits) Value seq514343 286 1e-72 seq499631 134 4e-27 >seq514343 Length=433 Score = 286 bits (316), Expect = 1e-72 Identities = 224/268 (84%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 39903 ACATCTGTAAAATAAAATTCTGCGTAAGCTATTTGCCATAACAGAAAATTACTAATGCGG 39962 || || ||||| || ||||||||||||||||||||||| | |||||||||||| || || Sbjct 270 ACTTCGGTAAAGTATAATTCTGCGTAAGCTATTTGCCACAGCAGAAAATTACTGATTCGA 211 Query 39963 TGTTCGCCACTTGTTCTTATTACTAAATCTACATCAGGTAGATTATGCGTGTAAAGATGC 40022 ||||||||||| |||| ||||| ||||||||| ||||||| ||| ||||||||||||||| Sbjct 210 TGTTCGCCACTGGTTCGTATTAATAAATCTACGTCAGGTAAATTTTGCGTGTAAAGATGC 151 Query 40023 TTATTTAATATTGAATCGTCAATAGAATCTATTGAAATTATATTATTTTTAACTTTATCA 40082 | ||||| |||| ||||||||||| || |||||||||||||||||||||||||| || Sbjct 150 TCATTTATAATTGCATCGTCAATAGCGTCAATTGAAATTATATTATTTTTAACTTTGTCG 91 Query 40083 CTAATTATTTTAACAGCATTTATGATTTCTTCTCTCGATCCGTAGCTTAATGCTAAGGTA 40142 || || || ||| |||| | ||||||||||| |||||||||||||||||||| || Sbjct 90 CTTATAGACTTCACAACATTAACAATTTCTTCTCTAGATCCGTAGCTTAATGCTAAAGTT 31 Query 40143 AGGGTCATTCTGGTATTGTTTTTTGTTT 40170 | || | | | ||||||||||| |||| Sbjct 30 AATGTGAGTTTCGTATTGTTTTTAGTTT 3 >seq499631 Length=253 Score = 134 bits (148), Expect = 4e-27 Identities = 131/169 (78%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 35683 AAGCTGTGCAAAATCCATGGAGGTCTAATACTCTTGAGTGGACTACACCAGTGGAACATG 35742 |||| | || |||||||||| | | |||| | || |||||||| ||||| ||||| Sbjct 252 AAGCAATTCAGAATCCATGGAAAGCAACTACTTTAGAATGGACTACTCCAGTAGAACACA 193 Query 35743 TACATGGAAACTGGCCAGGTGCTATCCCAGAAGTTTATAGATGGCCTTATGATTACAGTA 35802 | || ||||||||||| |||||||| || ||||| || |||||||| ||||||||||| | Sbjct 192 TTCACGGAAACTGGCCTGGTGCTATTCCTGAAGTGTACAGATGGCCATATGATTACAGCA 133 Query 35803 AACCAGGGCATGACGAAGATTTTGTTCCTCAAACTGTGCCAATGAAAGA 35851 ||||||| || | |||||||| || |||| || |||||||| || Sbjct 132 AACCAGGTTGGGATGTTGATTTTGTACCGCAAAACGTTCCAATGAAGGA 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149270651572560