Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 172 5e-38
seq152719 150 2e-31
seq59939 96.9 3e-15
seq152718 87.8 2e-12
seq6427 86.0 6e-12
>seq44246
Length=4029
Score = 172 bits (190), Expect = 5e-38
Identities = 976/1544 (63%), Gaps = 42/1544 (3%)
Strand=Plus/Minus
Query 138479 TCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAA 138538
||| ||| || | ||||| ||| | || ||| || || || | || || || ||
Sbjct 1785 TCAGGTCCTTGAGCAGATGGGGGTTGACGATCTGGAACTCTCCTGACAGGACCCGGCGGG 1726
Query 138539 CGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGG 138598
||| |||||| ||||| | | ||| | || |||||||| ||||| ||||| || ||||
Sbjct 1725 TGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGG 1666
Query 138599 TCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGAT--TCG 138656
|| || ||||| |||| || || |||| | ||||| |||| ||
Sbjct 1665 AGGCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTG---CTTGGCGATCT 1609
Query 138657 T-TCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
| ||||| ||| | ||||||||||| ||| | || | || | |||||| |||||||
Sbjct 1608 TCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTGGGCGTCTTCTCCCACATGTCGTACT 1549
Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCG 138775
| | || ||| || |||| |||| |||||| ||||| || | ||| |
Sbjct 1548 GGAGGATGCCCTTGCTGACGGGGGAGCCT-CGTACGTGTCGTAGGGGCCCAGCTCGGCGG 1490
Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835
||| ||| ||| ||||| || || | ||||| || || || ||||| || |
Sbjct 1489 CCAGTTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCA 1430
Query 138836 GCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCC 138895
||| ||||||||| ||| || | || || | || |||| ||||||||||| |
Sbjct 1429 GCAGCTGGGCCTCGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGC 1370
Query 138896 CTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG---A 138952
| || ||||| | |||| || | |||||| || ||| | |||| ||| |
Sbjct 1369 CCTGGACGCCGATACCGATCGGCCTGTGGCGCTTGTTGGAC---TGATCGGCCTCGGGCA 1313
Query 138953 TAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTAT 139012
|| || |||| | || ||||| ||||| | || ||||| ||| || ||| |
Sbjct 1312 CCGGGTAGAAGTTAATCTCTATGATCTTGTTCAGGTTCTTCACGATCACTTTGGTCACAG 1253
Query 139013 GCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGT 139072
|| | | | || || | || ||| ||| | ||||| ||| |||
Sbjct 1252 ACTCCAGTTTCTTGAAGTCAAAAGT----CCG--CTCGGGGGTGACGT--ACA----TGT 1205
Query 139073 TGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAA 139132
||| | || ||||| | || ||||| || || || ||| | |||||| || |
Sbjct 1204 TGAGAGCGATGGAGGCCAGATTACACACAGCGACCTCATCGCCACTGGAGTATTCAACGA 1145
Query 139133 TTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGT 139192
|||| | || | || || |||||||| || || | || || || ||||| || | ||
Sbjct 1144 TTTCCGTGCAGAGGTTGCTGCACTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGT 1085
Query 139193 TACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGA 139252
| || || |||||||| ||||| ||||| ||||| | ||| || | ||| || |||
Sbjct 1084 TGCAGGCGTCTTTGTACAGCATGTACGGCGTGCCCGACTCCGTCTGGGACTCGATGATGG 1025
Query 139253 ATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTT 139312
| ||| | | ||| | | |||| | | | || ||||| || |
Sbjct 1024 CGTGCCACACCTGCTGAGCCTTCACCACACGCTTGACCCGGCCCTCCCGCTCATATTGGG 965
Query 139313 CGTAGAGTTCGTCGAA-TCGTTCACC--GTAGGCGTCAGAAAGATCGCGACACTTGTCAG 139369
|||||| | || || || | | || | | |||| || || | | || | |
Sbjct 964 TGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTC---CAGCCCGGGGCTCTCGCTGG 908
Query 139370 GACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCC 139429
||||||| || ||||| | ||| || || | | |||||||||| || || ||||
Sbjct 907 GACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGGTCGGGGATCC 848
Query 139430 ACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGT 139489
|||| || | | | ||| | || ||| || ||| ||| |||| |||| |
Sbjct 847 ACAAGCCGTAGAAGAGATCTCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCT 788
Query 139490 TAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TT 139546
||||| || || |||||| |||||| || ||||| || ||||| | ||||| |
Sbjct 787 CCAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGTC 728
Query 139547 TCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCT 139606
| ||||| || || ||||| | ||| | | || ||| | || | || ||| ||
Sbjct 727 GCTTGTTGCCGCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAGACCCTCAGCATGGGGA 668
Query 139607 CCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCAT 139666
|||| ||| | | | |||||||||| |||| || | | ||||| | ||
Sbjct 667 CCAGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTGGATCGGATG-CAG 609
Query 139667 GT-ACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGT 139724
| || | |||||||| || | | ||||| || | | || | || | | ||
Sbjct 608 CTGACGGCCACACCGATTCCTCCTGCCGACTTGGAGATGAGTGCACACT-GCTTCAGCGT 550
Query 139725 CTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTG 139784
||||| || || ||||||||||||| ||| |||| ||| ||||| || || ||
Sbjct 549 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAGAGCTG 490
Query 139785 CGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGA 139844
|| | || || || || || || || || ||||| |||||| | | |||
Sbjct 489 AGGCCGGTTGGTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAACCACTTCTCCGA 430
Query 139845 CATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGAC 139904
| || | ||| || ||||||||| | |||||| | |||||| ||||| || ||
Sbjct 429 GAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATATCCGTCTTGTGGATTCCGACCGACAC 370
Query 139905 TCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--A 139962
| ||| ||||| || || ||| || ||||| ||| | ||| || ||| || |
Sbjct 369 CCTCATGAGCATGTGCTGCGGCCGCTCCGCCACTTTGCCGTTGATCTTCAGCAGGTAGGA 310
Query 139963 CCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| ||| || |||||| |||| ||| | | ||| ||||||
Sbjct 309 TCG--CTCCAGCGTCTTGAAGCCGAAGAAGTTGTAGGAGAAATC 268
>seq152719
Length=2073
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || ||||| ||||| || || || || ||| |||
Sbjct 727 GATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACTATCACTCTGGAGGTTGAACCCAG 668
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | |||||| |||||||| || || || || || ||||| |||||
Sbjct 667 CGACACCATTGAGAATGTAAAAGCTAAGATCCAGGATAAGGAGGGCATCCCTCCTGATCA 608
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||||| || |||||||| ||| | | |||||||||||||||
Sbjct 607 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACCATGTCAGATTATAA 548
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || || ||||| || | || | ||| |||| ||| | |||||
Sbjct 547 CATCCAGAAAGAATCCACCATCCATCTTGTGCTGCGCTTGAGAGGAGG 500
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || ||||| | || || || || || ||| ||| |
Sbjct 270 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGTCCATCACTCTGGAGGTTGAACCCAGC 211
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||| || || || || || ||||| |||||
Sbjct 210 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGATAAGGAGGGCATCCCTCCTGATCAG 151
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| | ||||||||||||| || |||||||| ||
Sbjct 150 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGA 116
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|| ||||||||| | || || || || || || ||||| || || | || ||| ||| |
Sbjct 498 ATTCAGATCTTTGTGAAGACCCTCACAGGCAAGACTATCACTCTGGTGGTTGAACCCAAC 439
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||| || || ||||| || ||||| || ||
Sbjct 438 GACACCATTGAGAATGTCAAAGCTAAGATCCAGGATAAGGAAGGCATCCCTCCAGACCAG 379
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| | | ||||||||||| || |||||||| ||
Sbjct 378 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGA 344
>seq59939
Length=800
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || ||||| || || | |
Sbjct 165 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGCCTAGT 106
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | |||| || || |||||||| ||||| ||||| || || || |||||
Sbjct 105 GACACAATCGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 46
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| | ||||||||||||| || |||||||| |||
Sbjct 45 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGAT 10
>seq152718
Length=3078
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || ||||| || || || || || || ||| ||| |
Sbjct 2373 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACTCTGGAGGTTGAACCCAGC 2314
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| ||||| || || || ||||| || ||| | || ||
Sbjct 2313 GACACCATTGAGAATGTCAAAGTTAAGATTCAGGATAAGGAAGGCATCCCTTCTGAACAG 2254
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
| | ||||||||||||| || |||||||| |||
Sbjct 2253 TACAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGAT 2218
>seq6427
Length=3314
Score = 86.0 bits (94), Expect = 6e-12
Identities = 132/187 (71%), Gaps = 1/187 (1%)
Strand=Plus/Minus
Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784
|| || || || || || || || || || || ||| |||||| | |||| || ||
Sbjct 3313 CTCACGGGCAAGACCATCACCCTGGAGGTTGAGCCCAGCGACACCATCGAAAATGTCAAG 3254
Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844
|||||||| ||||| ||||| || || || ||||| || | |||||||||||||
Sbjct 3253 GCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGCAGAGGCTGATCTTTGCCGGC 3194
Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904
|| |||||||| ||| | | | | || || || ||||| || ||||| || || ||
Sbjct 3193 AAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTC 3134
Query 24905 CA-CTTG 24910
|| ||||
Sbjct 3133 CATCTTG 3127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 446942323892560
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