Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq516804 140 5e-28 seq520776 87.8 3e-12 seq430277 86.0 1e-11 >seq516804 Length=734 Score = 140 bits (154), Expect = 5e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35564 ACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGG 35623 |||||| || || ||||| || || || ||||| | ||||||||| |||||||||||||| Sbjct 4 ACGCGCAGGAAGATTGGTGGTATTACTAAACTCTAAAGTCACATGCCCTTCCCACTCAGG 63 Query 35624 TTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACA 35683 || |||||||| ||||||||||| ||||| ||||| || ||||| ||||| | ||| Sbjct 64 CTCAAGCGGCGTGACGTTGACGATAATACCGCAGCGGGCATAGGTTGATTTACCAAGACA 123 Query 35684 CACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCT 35743 | | | || | ||| ||||| ||||| ||||| | |||||||| || || || Sbjct 124 AATCGTCAATACATCGCGTGGAATACGGAAATATTCCATGGTGCGTGCTAGCGCAAACGA 183 Query 35744 GTTCGGCGGAAT 35755 ||| || ||||| Sbjct 184 GTTTGGTGGAAT 195 >seq520776 Length=295 Score = 87.8 bits (96), Expect = 3e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 120225 TTTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCG 120284 || ||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct 231 TTAGCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGAGTTCG 290 Query 120285 A 120285 | Sbjct 291 A 291 >seq430277 Length=842 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/156 (74%), Gaps = 8/156 (5%) Strand=Plus/Plus Query 35454 GTCACACC-CGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCA--- 35509 ||||| || ||| || || || || |||||||||||||| || || | |||| || Sbjct 688 GTCACGCCGCGT-TGACCTTGATACTTACCGCCGCGATCTTTATAGCTGGTTTCACATAC 746 Query 35510 GTCCT---CGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACG 35566 ||| | | ||||| | |||||| ||||| || ||||| |||||| ||||| | ||| Sbjct 747 GTCATCAGCATCACTTTGGAAAAATAGCATTTGTGCCACCCCTTCGCCTGCGTAAATACG 806 Query 35567 CGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGT 35602 ||| || || ||||| ||||| || || |||| ||| Sbjct 807 CGCTGGTAGATTGGTGGTGTTACTAAATTCCAAAGT 842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 820491538372080