Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq516804 140 5e-28
seq520776 87.8 3e-12
seq430277 86.0 1e-11
>seq516804
Length=734
Score = 140 bits (154), Expect = 5e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35564 ACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGG 35623
|||||| || || ||||| || || || ||||| | ||||||||| ||||||||||||||
Sbjct 4 ACGCGCAGGAAGATTGGTGGTATTACTAAACTCTAAAGTCACATGCCCTTCCCACTCAGG 63
Query 35624 TTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACA 35683
|| |||||||| ||||||||||| ||||| ||||| || ||||| ||||| | |||
Sbjct 64 CTCAAGCGGCGTGACGTTGACGATAATACCGCAGCGGGCATAGGTTGATTTACCAAGACA 123
Query 35684 CACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCT 35743
| | | || | ||| ||||| ||||| ||||| | |||||||| || || ||
Sbjct 124 AATCGTCAATACATCGCGTGGAATACGGAAATATTCCATGGTGCGTGCTAGCGCAAACGA 183
Query 35744 GTTCGGCGGAAT 35755
||| || |||||
Sbjct 184 GTTTGGTGGAAT 195
>seq520776
Length=295
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 120225 TTTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCG 120284
|| ||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 231 TTAGCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGAGTTCG 290
Query 120285 A 120285
|
Sbjct 291 A 291
>seq430277
Length=842
Score = 86.0 bits (94), Expect = 1e-11
Identities = 115/156 (74%), Gaps = 8/156 (5%)
Strand=Plus/Plus
Query 35454 GTCACACC-CGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCA--- 35509
||||| || ||| || || || || |||||||||||||| || || | |||| ||
Sbjct 688 GTCACGCCGCGT-TGACCTTGATACTTACCGCCGCGATCTTTATAGCTGGTTTCACATAC 746
Query 35510 GTCCT---CGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACG 35566
||| | | ||||| | |||||| ||||| || ||||| |||||| ||||| | |||
Sbjct 747 GTCATCAGCATCACTTTGGAAAAATAGCATTTGTGCCACCCCTTCGCCTGCGTAAATACG 806
Query 35567 CGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGT 35602
||| || || ||||| ||||| || || |||| |||
Sbjct 807 CGCTGGTAGATTGGTGGTGTTACTAAATTCCAAAGT 842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 820491538372080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |