Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq75492 176 7e-38
seq44246 156 7e-32
seq70662 145 1e-28
seq443314 113 7e-19
seq86481 95.1 2e-13
seq70661 95.1 2e-13
seq6431 95.1 2e-13
seq231358 93.3 7e-13
seq75399 91.5 2e-12
seq103378 87.8 3e-11
>seq75492
Length=1479
Score = 176 bits (194), Expect = 7e-38
Identities = 187/247 (76%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| ||||||||||| ||||| || |||||||| ||||| || ||| |||
Sbjct 886 GTACTTGGTCACGGCCTTGGTGCCCTCGGACACGGCGTGTAATGCCAGCTCCCCGGGCAG 945
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
| || ||| |||||||||||||| || |||| | ||| ||| | | ||||| | |
Sbjct 946 CAGCATGCGGACGGCGGTCTGGATATCCCGGGAGGTGATGGTGGAGTGATTGTTGTAGTG 1005
Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650
||||||||| |||||| | ||||||| |||| ||||| | || || ||||||||
Sbjct 1006 AGCCAGGCGGGAGGCCTCTCCGGCGATGCGCTCGAAGATGTCCATCACGAAGGAGTTCAT 1065
Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710
|| | ||| | ||| |||||||| |||||||||||||||||| |||||||||||
Sbjct 1066 GACCTCCATGGCCTTGAAGGAGATGCTGGTGTCGGGGTGCACCTGCTTCAGCACCTTGTA 1125
Query 1485711 AACAAAG 1485717
||| ||
Sbjct 1126 CACAGAG 1132
>seq44246
Length=4029
Score = 156 bits (172), Expect = 7e-32
Identities = 191/261 (73%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596
|| ||||||||||||||| || |||| ||| |||| | |||||||| || || |||||
Sbjct 717 GCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAGACCCTCAGCATGGGGACCAGCCCGTT 658
Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656
||| | |||||||||||| || | |||| || | || || | | |||| |
Sbjct 657 GGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTGGATCGGATGCAGCTGACGGCCAC 598
Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716
||||| || || |||| |||||||||||| || |||| |||||||| |||||||||||
Sbjct 597 ACCGATTCCTCCTGCCGACTTGGAGATGAGTGCACACTGCTTCAGCGTGTCGTAGATGCC 538
Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776
|||||| |||| |||||||| | ||| ||||| ||| || || || ||
Sbjct 537 CTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAGAGCTGAGGCCGGTTGGT 478
Query 2073777 GCCGGCATTGAAGAGCGTGGG 2073797
|| || ||||||||||||||
Sbjct 477 TCCTGCGTTGAAGAGCGTGGG 457
Score = 136 bits (150), Expect = 6e-26
Identities = 287/434 (66%), Gaps = 0/434 (0%)
Strand=Plus/Minus
Query 2071579 ACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638
|||| || ||||| |||||| || | |||| |||||||||||||||||||| ||
Sbjct 1148 ACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTC 1089
Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698
|||| |||||| |||| ||||||||| |||| |||| ||| |||| | | || |
Sbjct 1088 CTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTGCCCGACTCCGTCTGGGACTCGATG 1029
Query 2071699 ATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNN 2071758
||||| ||| | || | || |||| | | | |||||||
Sbjct 1028 ATGGCGTGCCACACCTGCTGAGCCTTCACCACACGCTTGACCCGGCCCTCCCGCTCATAT 969
Query 2071759 NNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGAC 2071818
|||| ||||| | | || |||||||| ||| ||||| ||||
Sbjct 968 TGGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCTCTCGCTG 909
Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878
|| || | || |||||||| | || |||| | ||| ||||||||| ||
Sbjct 908 GGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGGTCGGGGATC 849
Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938
|||| |||||| |||||||| | || | | ||||||||| || |||||| |||||
Sbjct 848 CACAAGCCGTAGAAGAGATCTCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGC 789
Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998
|| || |||||| | ||| |||||||||||||||||| ||| ||||||||
Sbjct 788 TCCAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGT 729
Query 2071999 CGCTTGCCGCCGCC 2072012
|||||| ||||||
Sbjct 728 CGCTTGTTGCCGCC 715
Score = 104 bits (114), Expect = 4e-16
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 2069565 CCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACCACGGTAAAGTCGCC 2069624
|||||| || | | || ||| | || || ||| ||| ||||||| | || || ||
Sbjct 1802 CCACAGCCCTCTCTCCGTCAGGTCCTTGAGCAGATGGGGGTTGACGATCTGGAACTCTCC 1743
Query 2069625 CGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGCC 2069684
|| || || ||||| |||||||||||||| ||| | ||||| | |||| |||||||
Sbjct 1742 TGACAGGACCCGGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCC 1683
Query 2069685 CAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGCC 2069744
||||||||| | || | |||||||||||| | |||| ||||| ||| | || |||
Sbjct 1682 CAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCC 1623
Query 2069745 GTACT 2069749
|| ||
Sbjct 1622 GTGCT 1618
Score = 93.3 bits (102), Expect = 7e-13
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGCGCCGGCGCTCTCC 2070111
|| || | |||||| ||||||||||| | ||| || | | || ||| ||| ||
Sbjct 1466 GCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCCTCGGGGCTTTCA 1407
Query 2070112 CACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGC 2070171
| || ||||| | || ||||||||||||||||| ||||||| || ||||||
Sbjct 1406 AAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGCCCTGGACGCCGATACCGATCGGC 1347
Query 2070172 CGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
| ||||||| ||| || || ||||||||||||||||||| ||| || || ||
Sbjct 1346 CTGTGGCGCTTGTTGGACTGATCGGCCTCGGGCACCGGGTAGAAGTTAATCTCTAT 1291
>seq70662
Length=316
Score = 145 bits (160), Expect = 1e-28
Identities = 164/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 1485494 CCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGA 1485553
|||| || |||||||| | ||||| || ||| ||| | |||||| ||||||||||| |
Sbjct 316 CCTCAGACACGGCGTGTTTAGCCAGCTCCCCGGGCAGCAGCAGGCGGACGGCGGTCTGAA 257
Query 1485554 TCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGC 1485613
|||| | || | ||| ||| ||||||||| | | ||||| || |||||| |
Sbjct 256 TCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGTGAGCCAGACGAGAGGCCTCACCGG 197
Query 1485614 CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGA 1485673
||||||| |||| |||||| | || || ||||||||||| ||| | ||| |||||
Sbjct 196 CGATGCGCTCGAAGATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGA 137
Query 1485674 TGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713
| || ||||||||| |||||||| ||||||||||| ||
Sbjct 136 TCCCAGTGTCGGGGTGGACCTGCTTCAGCACCTTGTACAC 97
>seq443314
Length=301
Score = 113 bits (124), Expect = 7e-19
Identities = 113/147 (77%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626
||| ||| ||||||||| | | ||||||||| |||||| | ||||||| ||||
Sbjct 299 GATGGTGGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCCCCGGCGATGCGCTCGAA 240
Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686
|||||| | || || ||||||||||| ||| | ||| ||||||||| ||||||
Sbjct 239 GATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGG 180
Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAAC 1485713
|||||||||||| ||||||||||| ||
Sbjct 179 GTGCACCTGCTTCAGCACCTTGTACAC 153
>seq86481
Length=4042
Score = 95.1 bits (104), Expect = 2e-13
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 434126 CGTGATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 434185
||| |||||||||||||| ||||||||||| |||| ||||| || ||| | |||||
Sbjct 811 CGTCATCTCCTTTGACGGTTCCTACGTCAACTACCGTCACTTGGCTCTGCTCTGTGACAC 752
Query 434186 CATGTGCTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGG 434237
|||| ||| ||||| || ||||| ||||||| |||||| ||||||||
Sbjct 751 CATGACCTGCCGCGGTCACCTGATGGCCATCACGCGTCACGGCATCAACCGG 700
>seq70661
Length=246
Score = 95.1 bits (104), Expect = 2e-13
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626
||| ||| ||||||||| | | ||||| || |||||| | ||||||| ||||
Sbjct 243 GATGGTGGAGCGCTTGTTGTAGTGAGCCAGACGAGAGGCCTCACCGGCGATGCGCTCGAA 184
Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686
|||||| | || || ||||||||||| ||| | ||| |||||| || ||||||
Sbjct 183 GATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATCCCAGTGTCGGG 124
Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAAC 1485713
||| |||||||| ||||||||||| ||
Sbjct 123 GTGGACCTGCTTCAGCACCTTGTACAC 97
>seq6431
Length=248
Score = 95.1 bits (104), Expect = 2e-13
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626
||| ||| ||||||||| | ||||| || |||||| | ||||||| ||||
Sbjct 245 GATGGTGGAGCGCTTGTTGTAATGAGCCAGACGAGAGGCCTCACCGGCGATGCGCTCGAA 186
Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686
|||||| | || || ||||||||||| ||| | |||| |||||| || ||||||
Sbjct 185 GATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCTTTGGAGGAGATCCCAGTGTCGGG 126
Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAAC 1485713
||| |||||||| ||||||||||| ||
Sbjct 125 GTGGACCTGCTTCAGCACCTTGTACAC 99
>seq231358
Length=2322
Score = 93.3 bits (102), Expect = 7e-13
Identities = 71/84 (85%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||| ||| ||| |||||||||||||| ||| |||| ||||||||||| || |||
Sbjct 1024 GGCTCCCTGATGTACGTGTCGATGAGGAGGCTGTACATCTCCGAGTGGATGTTCTCCATG 1083
Query 794644 GCGATCTGGAAGCCATAAAAGCAG 794667
||||||||||||||||| ||||||
Sbjct 1084 GCGATCTGGAAGCCATAGAAGCAG 1107
>seq75399
Length=564
Score = 91.5 bits (100), Expect = 2e-12
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| ||||||||||| ||||| || |||||||| | ||||| || ||| |||
Sbjct 464 TGTACTTGGTCACGGCCTTGGTGCCCTCAGACACGGCGTGTTTAGCCAGCTCCCCGGGCA 523
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTC 1485557
| |||||| ||||||||||| |||||
Sbjct 524 GCAGCAGGCGGACGGCGGTCTGAATCTC 551
>seq103378
Length=1867
Score = 87.8 bits (96), Expect = 3e-11
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643
||| |||||||| ||| || | |||| ||||| |||||||||||||| || |||
Sbjct 1771 CTCTGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGTTGCTCTTCCCGTT 1712
Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703
| ||||||||||| |||||||| |||| |||||| || |||| | | || ||||||
Sbjct 1711 GCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTTTCAGTCTGTGACTCGATGATGGC 1652
Query 2071704 CGACCA 2071709
||||
Sbjct 1651 GTACCA 1646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7860346355445378
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