Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq75492 176 7e-38 seq44246 156 7e-32 seq70662 145 1e-28 seq443314 113 7e-19 seq86481 95.1 2e-13 seq70661 95.1 2e-13 seq6431 95.1 2e-13 seq231358 93.3 7e-13 seq75399 91.5 2e-12 seq103378 87.8 3e-11 >seq75492 Length=1479 Score = 176 bits (194), Expect = 7e-38 Identities = 187/247 (76%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| ||||||||||| ||||| || |||||||| ||||| || ||| ||| Sbjct 886 GTACTTGGTCACGGCCTTGGTGCCCTCGGACACGGCGTGTAATGCCAGCTCCCCGGGCAG 945 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 | || ||| |||||||||||||| || |||| | ||| ||| | | ||||| | | Sbjct 946 CAGCATGCGGACGGCGGTCTGGATATCCCGGGAGGTGATGGTGGAGTGATTGTTGTAGTG 1005 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 ||||||||| |||||| | ||||||| |||| ||||| | || || |||||||| Sbjct 1006 AGCCAGGCGGGAGGCCTCTCCGGCGATGCGCTCGAAGATGTCCATCACGAAGGAGTTCAT 1065 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || | ||| | ||| |||||||| |||||||||||||||||| ||||||||||| Sbjct 1066 GACCTCCATGGCCTTGAAGGAGATGCTGGTGTCGGGGTGCACCTGCTTCAGCACCTTGTA 1125 Query 1485711 AACAAAG 1485717 ||| || Sbjct 1126 CACAGAG 1132 >seq44246 Length=4029 Score = 156 bits (172), Expect = 7e-32 Identities = 191/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||||||||||||||| || |||| ||| |||| | |||||||| || || ||||| Sbjct 717 GCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAGACCCTCAGCATGGGGACCAGCCCGTT 658 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 ||| | |||||||||||| || | |||| || | || || | | |||| | Sbjct 657 GGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTGGATCGGATGCAGCTGACGGCCAC 598 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||||| || || |||| |||||||||||| || |||| |||||||| ||||||||||| Sbjct 597 ACCGATTCCTCCTGCCGACTTGGAGATGAGTGCACACTGCTTCAGCGTGTCGTAGATGCC 538 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 |||||| |||| |||||||| | ||| ||||| ||| || || || || Sbjct 537 CTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAGAGCTGAGGCCGGTTGGT 478 Query 2073777 GCCGGCATTGAAGAGCGTGGG 2073797 || || |||||||||||||| Sbjct 477 TCCTGCGTTGAAGAGCGTGGG 457 Score = 136 bits (150), Expect = 6e-26 Identities = 287/434 (66%), Gaps = 0/434 (0%) Strand=Plus/Minus Query 2071579 ACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638 |||| || ||||| |||||| || | |||| |||||||||||||||||||| || Sbjct 1148 ACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTC 1089 Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698 |||| |||||| |||| ||||||||| |||| |||| ||| |||| | | || | Sbjct 1088 CTGTTGCAGGCGTCTTTGTACAGCATGTACGGCGTGCCCGACTCCGTCTGGGACTCGATG 1029 Query 2071699 ATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNN 2071758 ||||| ||| | || | || |||| | | | ||||||| Sbjct 1028 ATGGCGTGCCACACCTGCTGAGCCTTCACCACACGCTTGACCCGGCCCTCCCGCTCATAT 969 Query 2071759 NNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGAC 2071818 |||| ||||| | | || |||||||| ||| ||||| |||| Sbjct 968 TGGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCTCTCGCTG 909 Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 || || | || |||||||| | || |||| | ||| ||||||||| || Sbjct 908 GGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAGGTCGGGGATC 849 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 |||| |||||| |||||||| | || | | ||||||||| || |||||| ||||| Sbjct 848 CACAAGCCGTAGAAGAGATCTCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGC 789 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998 || || |||||| | ||| |||||||||||||||||| ||| |||||||| Sbjct 788 TCCAGGAAGTCGAACACGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGT 729 Query 2071999 CGCTTGCCGCCGCC 2072012 |||||| |||||| Sbjct 728 CGCTTGTTGCCGCC 715 Score = 104 bits (114), Expect = 4e-16 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 2069565 CCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACCACGGTAAAGTCGCC 2069624 |||||| || | | || ||| | || || ||| ||| ||||||| | || || || Sbjct 1802 CCACAGCCCTCTCTCCGTCAGGTCCTTGAGCAGATGGGGGTTGACGATCTGGAACTCTCC 1743 Query 2069625 CGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACGCCTCGGTGTTGCC 2069684 || || || ||||| |||||||||||||| ||| | ||||| | |||| ||||||| Sbjct 1742 TGACAGGACCCGGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCC 1683 Query 2069685 CAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCGAGTTGCGCAGGCC 2069744 ||||||||| | || | |||||||||||| | |||| ||||| ||| | || ||| Sbjct 1682 CAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCC 1623 Query 2069745 GTACT 2069749 || || Sbjct 1622 GTGCT 1618 Score = 93.3 bits (102), Expect = 7e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGCGCCGGCGCTCTCC 2070111 || || | |||||| ||||||||||| | ||| || | | || ||| ||| || Sbjct 1466 GCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCCTCGGGGCTTTCA 1407 Query 2070112 CACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGC 2070171 | || ||||| | || ||||||||||||||||| ||||||| || |||||| Sbjct 1406 AAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGCCCTGGACGCCGATACCGATCGGC 1347 Query 2070172 CGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 | ||||||| ||| || || ||||||||||||||||||| ||| || || || Sbjct 1346 CTGTGGCGCTTGTTGGACTGATCGGCCTCGGGCACCGGGTAGAAGTTAATCTCTAT 1291 >seq70662 Length=316 Score = 145 bits (160), Expect = 1e-28 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 1485494 CCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGA 1485553 |||| || |||||||| | ||||| || ||| ||| | |||||| ||||||||||| | Sbjct 316 CCTCAGACACGGCGTGTTTAGCCAGCTCCCCGGGCAGCAGCAGGCGGACGGCGGTCTGAA 257 Query 1485554 TCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGC 1485613 |||| | || | ||| ||| ||||||||| | | ||||| || |||||| | Sbjct 256 TCTCCCTGGAGGTGATGGTGGAGCGCTTGTTGTAGTGAGCCAGACGAGAGGCCTCACCGG 197 Query 1485614 CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGA 1485673 ||||||| |||| |||||| | || || ||||||||||| ||| | ||| ||||| Sbjct 196 CGATGCGCTCGAAGATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGA 137 Query 1485674 TGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 | || ||||||||| |||||||| ||||||||||| || Sbjct 136 TCCCAGTGTCGGGGTGGACCTGCTTCAGCACCTTGTACAC 97 >seq443314 Length=301 Score = 113 bits (124), Expect = 7e-19 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626 ||| ||| ||||||||| | | ||||||||| |||||| | ||||||| |||| Sbjct 299 GATGGTGGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCCCCGGCGATGCGCTCGAA 240 Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686 |||||| | || || ||||||||||| ||| | ||| ||||||||| |||||| Sbjct 239 GATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGG 180 Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAAC 1485713 |||||||||||| ||||||||||| || Sbjct 179 GTGCACCTGCTTCAGCACCTTGTACAC 153 >seq86481 Length=4042 Score = 95.1 bits (104), Expect = 2e-13 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 434126 CGTGATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 434185 ||| |||||||||||||| ||||||||||| |||| ||||| || ||| | ||||| Sbjct 811 CGTCATCTCCTTTGACGGTTCCTACGTCAACTACCGTCACTTGGCTCTGCTCTGTGACAC 752 Query 434186 CATGTGCTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCGG 434237 |||| ||| ||||| || ||||| ||||||| |||||| |||||||| Sbjct 751 CATGACCTGCCGCGGTCACCTGATGGCCATCACGCGTCACGGCATCAACCGG 700 >seq70661 Length=246 Score = 95.1 bits (104), Expect = 2e-13 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626 ||| ||| ||||||||| | | ||||| || |||||| | ||||||| |||| Sbjct 243 GATGGTGGAGCGCTTGTTGTAGTGAGCCAGACGAGAGGCCTCACCGGCGATGCGCTCGAA 184 Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686 |||||| | || || ||||||||||| ||| | ||| |||||| || |||||| Sbjct 183 GATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATCCCAGTGTCGGG 124 Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||| |||||||| ||||||||||| || Sbjct 123 GTGGACCTGCTTCAGCACCTTGTACAC 97 >seq6431 Length=248 Score = 95.1 bits (104), Expect = 2e-13 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 1485567 GATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGAT 1485626 ||| ||| ||||||||| | ||||| || |||||| | ||||||| |||| Sbjct 245 GATGGTGGAGCGCTTGTTGTAATGAGCCAGACGAGAGGCCTCACCGGCGATGCGCTCGAA 186 Query 1485627 CATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGG 1485686 |||||| | || || ||||||||||| ||| | |||| |||||| || |||||| Sbjct 185 GATGTCGCTCACGAAGGAGTTCATGATGCCCATGGCTTTGGAGGAGATCCCAGTGTCGGG 126 Query 1485687 GTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||| |||||||| ||||||||||| || Sbjct 125 GTGGACCTGCTTCAGCACCTTGTACAC 99 >seq231358 Length=2322 Score = 93.3 bits (102), Expect = 7e-13 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||| ||| ||| |||||||||||||| ||| |||| ||||||||||| || ||| Sbjct 1024 GGCTCCCTGATGTACGTGTCGATGAGGAGGCTGTACATCTCCGAGTGGATGTTCTCCATG 1083 Query 794644 GCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||||||||| |||||| Sbjct 1084 GCGATCTGGAAGCCATAGAAGCAG 1107 >seq75399 Length=564 Score = 91.5 bits (100), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| ||||| || |||||||| | ||||| || ||| ||| Sbjct 464 TGTACTTGGTCACGGCCTTGGTGCCCTCAGACACGGCGTGTTTAGCCAGCTCCCCGGGCA 523 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTC 1485557 | |||||| ||||||||||| ||||| Sbjct 524 GCAGCAGGCGGACGGCGGTCTGAATCTC 551 >seq103378 Length=1867 Score = 87.8 bits (96), Expect = 3e-11 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 2071584 CTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTT 2071643 ||| |||||||| ||| || | |||| ||||| |||||||||||||| || ||| Sbjct 1771 CTCTGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGTTGCTCTTCCCGTT 1712 Query 2071644 GACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGATGGC 2071703 | ||||||||||| |||||||| |||| |||||| || |||| | | || |||||| Sbjct 1711 GCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTTTCAGTCTGTGACTCGATGATGGC 1652 Query 2071704 CGACCA 2071709 |||| Sbjct 1651 GTACCA 1646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7860346355445378