Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq152719 120 2e-22 seq59939 111 1e-19 seq152718 102 5e-17 seq59938 96.9 2e-15 >seq152719 Length=2073 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| || || |||||| |||||| | ||| ||||| ||||| ||||| || Sbjct 272 CCTCCTCTCAGCCGCAAGACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTCGGAG 331 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| | || ||||| ||||| ||||| ||||| || | ||||||||| | || Sbjct 332 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 391 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || ||||| || | || || |||||| || || || | || |||| || | Sbjct 392 ATGCCTTCCTTATCCTGGATCTTAGCTTTGAC--ATTCTCAATGGTGTCGTTGGGTTCAA 449 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | | | || || ||||| || ||||||||||| ||||||||||| || Sbjct 450 CCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAAT 498 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | ||| || || || |||||| || ||||| |||||||| || || Sbjct 500 CCTCCTCTCAAGCGCAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTGAC 559 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | |||| |||| ||||| ||||| ||||| |||||||| | ||||| || | || Sbjct 560 ATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 619 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | |||||||| || | || || ||| || || || || | || ||| || | Sbjct 620 ATGCCCTCCTTATCCTGGATCTTAGCTTTTAC--ATTCTCAATGGTGTCGCTGGGTTCAA 677 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || ||||| || || |||||||| |||||||||||||| Sbjct 678 CCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 726 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| | || || || || | |||| ||| ||||| ||||| ||||| || Sbjct 44 CCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 103 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| | || ||||| ||||| ||||| |||||||| | ||||| || | || Sbjct 104 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 163 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | |||||||| || | || || |||||| || || || | || ||| || | Sbjct 164 ATGCCCTCCTTATCCTGGATCTTAGCTTTGAC--ATTCTCAATGGTGTCGCTGGGTTCAA 221 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||| ||| || || |||||||| |||||||||||||| Sbjct 222 CCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270 >seq59939 Length=800 Score = 111 bits (122), Expect = 1e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 34815 TGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCC 34874 |||| |||| ||||| ||||||||||| |||||||| | ||||| ||| | || | | Sbjct 3 TGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGC 62 Query 34875 CCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAA 34934 | |||||||| | || || ||||| | | || | ||| | | ||| || || | Sbjct 63 CTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGA 122 Query 34935 CGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| |||||||| |||||||||||||| ||||||||||||||| Sbjct 123 GGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 166 >seq152718 Length=3078 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||| |||| || || ||| || || | |||| ||| ||||| ||| | ||||| || Sbjct 2147 CCTCTTCTCAGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCGGAG 2206 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| ||||| |||||||| | | ||| || || Sbjct 2207 AGAGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAAGGG 2266 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || ||||| || | || || |||||| || || || | || ||| || | Sbjct 2267 ATGCCTTCCTTATCCTGAATCTTAACTTTGAC--ATTCTCAATGGTGTCGCTGGGTTCAA 2324 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||| || || |||||||| |||||||||||||| Sbjct 2325 CCTCCAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2373 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| |||| || || |||||| || | ||| ||| ||||| ||| | || || || Sbjct 2375 CCTCCTCTCAGCCGCAAGACCAGATGGAGGGTAGACTCTTTCTGGATGCTGTATTCGGAG 2434 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| || ||||| |||| ||| | ||| | || | ||||||||| || Sbjct 2435 AGAGTGCGGCTGTCTTCCAGCAGCTTGCCGCCAAAGTTGAGCCTCTGCTGGTCTGTAGGG 2494 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | || ||||| || | || || ||||| || |||| || ||| ||| || Sbjct 2495 AATCCTTCCTTATCTTGGATCTTGGCTTTGAA--AT--TATCAATGGTGTCACTGGGTTC 2550 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | | ||| ||||| || ||||||||||| ||||||||||| || Sbjct 2551 AACCTCCAGAGCTATAGTCTTCCCTGTGAGGGTCTTCACAAAGATCTGAAT 2601 >seq59938 Length=2926 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| ||||||||| | | |||| ||||||||| ||||| || || Sbjct 2712 CCACCCCTCAGATGCAGGACCAGACGGAGGGTGGACTCCTTCTGGATGTTGTATA--GAG 2769 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||| ||||| ||||| |||||||| | ||||| ||| | || Sbjct 2770 AGGGTGCGGCCATCTTCCGAATGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 2829 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || ||||| | | || | || ||| ||| || Sbjct 2830 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCAACC 2889 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 || | ||| |||||||| || ||||||||||| || Sbjct 2890 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 2924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323606882345738