Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 120 2e-22
seq59939 111 1e-19
seq152718 102 5e-17
seq59938 96.9 2e-15
>seq152719
Length=2073
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| |||| || || |||||| |||||| | ||| ||||| ||||| ||||| ||
Sbjct 272 CCTCCTCTCAGCCGCAAGACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTCGGAG 331
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| | || ||||| ||||| ||||| ||||| || | ||||||||| | ||
Sbjct 332 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 391
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || ||||| || | || || |||||| || || || | || |||| || |
Sbjct 392 ATGCCTTCCTTATCCTGGATCTTAGCTTTGAC--ATTCTCAATGGTGTCGTTGGGTTCAA 449
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| | | || || ||||| || ||||||||||| ||||||||||| ||
Sbjct 450 CCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAAT 498
Score = 114 bits (126), Expect = 8e-21
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| ||||| | ||| || || || |||||| || ||||| |||||||| || ||
Sbjct 500 CCTCCTCTCAAGCGCAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTGAC 559
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
| | |||| |||| ||||| ||||| ||||| |||||||| | ||||| || | ||
Sbjct 560 ATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 619
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| |||||||| || | || || ||| || || || || | || ||| || |
Sbjct 620 ATGCCCTCCTTATCCTGGATCTTAGCTTTTAC--ATTCTCAATGGTGTCGCTGGGTTCAA 677
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || || ||||| || || |||||||| ||||||||||||||
Sbjct 678 CCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 726
Score = 105 bits (116), Expect = 4e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| |||| | || || || || | |||| ||| ||||| ||||| ||||| ||
Sbjct 44 CCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 103
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| | || ||||| ||||| ||||| |||||||| | ||||| || | ||
Sbjct 104 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 163
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| |||||||| || | || || |||||| || || || | || ||| || |
Sbjct 164 ATGCCCTCCTTATCCTGGATCTTAGCTTTGAC--ATTCTCAATGGTGTCGCTGGGTTCAA 221
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || |||| ||| || || |||||||| ||||||||||||||
Sbjct 222 CCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270
>seq59939
Length=800
Score = 111 bits (122), Expect = 1e-19
Identities = 123/164 (75%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 34815 TGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCC 34874
|||| |||| ||||| ||||||||||| |||||||| | ||||| ||| | || | |
Sbjct 3 TGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGC 62
Query 34875 CCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAA 34934
| |||||||| | || || ||||| | | || | ||| | | ||| || || |
Sbjct 63 CTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGA 122
Query 34935 CGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 123 GGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 166
>seq152718
Length=3078
Score = 102 bits (112), Expect = 5e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|||| |||| || || ||| || || | |||| ||| ||||| ||| | ||||| ||
Sbjct 2147 CCTCTTCTCAGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCGGAG 2206
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| ||||| |||||||| | | ||| || ||
Sbjct 2207 AGAGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAAGGG 2266
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || ||||| || | || || |||||| || || || | || ||| || |
Sbjct 2267 ATGCCTTCCTTATCCTGAATCTTAACTTTGAC--ATTCTCAATGGTGTCGCTGGGTTCAA 2324
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || |||||||| || || |||||||| ||||||||||||||
Sbjct 2325 CCTCCAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2373
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| |||| || || |||||| || | ||| ||| ||||| ||| | || || ||
Sbjct 2375 CCTCCTCTCAGCCGCAAGACCAGATGGAGGGTAGACTCTTTCTGGATGCTGTATTCGGAG 2434
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| || ||||| |||| ||| | ||| | || | ||||||||| ||
Sbjct 2435 AGAGTGCGGCTGTCTTCCAGCAGCTTGCCGCCAAAGTTGAGCCTCTGCTGGTCTGTAGGG 2494
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926
| || ||||| || | || || ||||| || |||| || ||| ||| ||
Sbjct 2495 AATCCTTCCTTATCTTGGATCTTGGCTTTGAA--AT--TATCAATGGTGTCACTGGGTTC 2550
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | | ||| ||||| || ||||||||||| ||||||||||| ||
Sbjct 2551 AACCTCCAGAGCTATAGTCTTCCCTGTGAGGGTCTTCACAAAGATCTGAAT 2601
>seq59938
Length=2926
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| ||||||||| | | |||| ||||||||| ||||| || ||
Sbjct 2712 CCACCCCTCAGATGCAGGACCAGACGGAGGGTGGACTCCTTCTGGATGTTGTATA--GAG 2769
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||| ||||| ||||| |||||||| | ||||| ||| | ||
Sbjct 2770 AGGGTGCGGCCATCTTCCGAATGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 2829
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || ||||| | | || | || ||| ||| ||
Sbjct 2830 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCAACC 2889
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
|| | ||| |||||||| || ||||||||||| ||
Sbjct 2890 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 2924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323606882345738
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