Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_022744.1
Length=39860
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 190 5e-44
>seq512931
Length=538
Score = 190 bits (210), Expect = 5e-44
Identities = 375/541 (69%), Gaps = 44/541 (8%)
Strand=Plus/Plus
Query 37670 CCCGACCACTCACCCTCTGTGAAGTCTGTAGGTATTACTGGTCAGT-TGACTGGTAGCCG 37728
|| |||||| ||||| |||||||| || ||| ||||||| | || |||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 37729 TGCTGACATTATCATTGCGGATGACGTTGAGGTTCCCGGCAACAGTTCTACAAGCTCTGC 37788
||||||||| |||||||||||||||||||||| ||||||||| | ||| || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 37789 TCGTGAGAAGCTGTGGACA-CTGGTAACTGAGTTTGCTGCGTTGCTTAAGCCGTTACCTA 37847
| || | || ||| | ||||||| || || | |||| | || ||||| | ||
Sbjct 129 AAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC-TGACGGT 186
Query 37848 CCTCTCGTGTTATCTACCTTGGGACACCTCAAACCGAGATGACTCTCTATAAGGAACTTG 37907
| || |||||| | || || || || ||||| ||||| ||||| | ||||||||
Sbjct 187 ACGATC-----ATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241
Query 37908 AGGATAACAAAGGGTACAGCACAGTAATCTGGCCAGCACAGTATCCACGTAATGATGCTG 37967
||| || || ||| || |||||||| |||| || || || ||| ||||
Sbjct 242 AGG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTG 298
Query 37968 A----GGCTCTCTACT---------ATGGAGACCGCT------TGG---CTCCAATGCTT 38005
| | || ||||| | || | |||| ||| | | |||||
Sbjct 299 ACCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC 357
Query 38006 AAGCAAGAGTATGATGAAGGCTACGAGATTCT-TCGTGGACAACCTACTGACCCTATTCG 38064
||| ||| || |||| | |||||| || | |||| | ||||| |||||||||||
Sbjct 358 AAG---GAG-CTG--GAAGACGACGAGAAGCTGTTCTGGA-AGCCTACAGACCCTATTCG 410
Query 38065 ATTCGATATGGATGACCTCCGTGAACGTGAACTTGAATATGGTAAAGCTGGTTACACGTT 38124
||||||| || ||||| ||||| || ||||| |||||| || | ||| | | | |
Sbjct 411 ATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCT 470
Query 38125 ACAGTTCATGCTCAACCCTAACCTGTCCGATGCTGAGAAGTACCCGCTGAGGCTCCGTGA 38184
|||||||||||||||||| ||||| ||| |||||||||||| ||| ||| |||||
Sbjct 471 ACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530
Query 38185 T 38185
|
Sbjct 531 T 531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126635191455528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |