Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq503870 255 1e-63 >seq503870 Length=567 Score = 255 bits (282), Expect = 1e-63 Identities = 301/406 (74%), Gaps = 1/406 (0%) Strand=Plus/Minus Query 18673 GTTATAAAACATTTCGATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTA 18732 ||| |||||||| ||||||||||| || | |||| | ||||| || | || || ||| Sbjct 485 GTTGTAAAACATCTCGATGTAATCGAACACATCATCCCGAGCATCCTGGCGTGTAGTGTA 426 Query 18733 GATCTTTTTCTTTATCCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTT 18792 ||| || ||| |||||||| || || || ||||||||||| || || || || ||||| Sbjct 425 GATTTTACGCTTGATCCGTTCCCGCTTTAGCAGCTGGAAAAAGCTCTCCGCTACAGCGTT 366 Query 18793 GTCATGACAGTTACCGCGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGA 18852 ||| || |||||||| ||||| ||||| ||| | |||| || | ||||| ||| Sbjct 365 GTCGTGGCAGTTACCTCGACGACTCATGCTGGCTACCAGGTTGTTAGCTTTCAAGAAGCT 306 Query 18853 CTGCCACTCATAGCTTGTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTG 18912 |||| || |||| ||||||||||||||||||| || || | || ||||| | | Sbjct 305 TCGCCAGTCTGAGCTGCTGTACTGACTGCCTTGATCCGAGTGGATCATCACCTCTTGCTT 246 Query 18913 AGGATTACGTCGCCACACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCG 18972 || ||||||| ||| || |||||||| ||||||| | | | | || | |||||| | Sbjct 245 CGGCTTACGTCTCCAAACCGCCATCAGCAGTGCATCAATGGCTACGTCGCTGGTCATCTG 186 Query 18973 GGGCTGCATTGACCAGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATA 19032 | || ||||||||| ||||| | | ||| || ||||| || | ||||| |||| ||| Sbjct 185 CGACTTCATTGACCAACCAATGATCTGGCGTGAAAACAGATCGAGCACCACGGCCAAATA 126 Query 19033 CAGCCAGCCTTCGTGAG-TCCGGATGTAGGTGATGTCCGTTACCCA 19077 |||||||||||| | | | ||||||||||| ||||| || ||||| Sbjct 125 CAGCCAGCCTTCATATGTTTCGGATGTAGGTAATGTCTGTGACCCA 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126310828301280