Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023548.1 Length=39651 Score E Sequences producing significant alignments: (Bits) Value seq512931 246 8e-61 >seq512931 Length=538 Score = 246 bits (272), Expect = 8e-61 Identities = 364/511 (71%), Gaps = 25/511 (5%) Strand=Plus/Plus Query 37424 CCAGACCACTCACCTTCCGTGAAGTCTGTGGGTATCACTGGTCAGT-TGACTGGTAGCCG 37482 || |||||| || || |||||||| |||||| | ||||| | || ||||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 37483 TGCTGACATCCTGATTGCTGATGACGTCGAGGTTCCAAACAACAGTGCGACTCAGGCTGC 37542 |||||||||||| ||||| |||||||| ||||| || |||| || || ||| | || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 37543 TCGTGGGCGACTCAGTGAGCTTGTGAAAGAGTTTGATGCTATCCTGAAGCCTGAAGGTAC 37602 | | | || | ||||| || || || || ||||| |||||||||||||| ||||| Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188 Query 37603 AATCATCTACCTGGGGACTCCACAGACCGAGATGACGCTATACCGTGAGCTAGAGAACCG 37662 ||||||||| |||| || ||||||||||| ||||| || ||| | || || ||| |||| Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248 Query 37663 TGGGTACACCACAACCATCTGGCCTGCACGTTATCCCCGTGATAAGAAGGACTGGGACTC 37722 || ||| | || || |||||||||||||| || || || ||| | ||| || || Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308 Query 37723 CTA-TGG------------------TCATCGACTGGCTCCTATGCTGGTGGAAGAACTCA 37763 ||| ||| ||| || |||| | || || | | || || Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCA-CGTCTGGACCTTACCATGCTCAAGGAGCTGG 367 Query 37764 ATGAAGACCCTGAAGGCTACTATTGGACTCCCACAGACTCGGTTCGATTTGATGACAAGG 37823 | || || | ||| ||| | |||| || |||||| | ||||||| ||||| | | Sbjct 368 AAGACGA-CGAGAA-GCT-GTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAG 424 Query 37824 ACTTGAAGGAACGTGAGCTATCCTACGGGAAGGCTGGCTTTGCTTTACAGTTCATGCTCA 37883 || || || || || || || || || |||| |||||| ||| ||||||||||||||| Sbjct 425 ACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCA 484 Query 37884 ACCCTAACCTTAGCGATGCTGAGAAGTACCC 37914 |||| ||||||||||| ||||||||||| Sbjct 485 ACCCGAACCTTAGCGACATCGAGAAGTACCC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125970564992412