Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq449735 343 3e-89 seq128994 230 4e-55 seq497288 158 2e-33 seq511105 154 3e-32 seq353462 120 5e-22 seq522862 93.3 7e-14 >seq449735 Length=3187 Score = 343 bits (380), Expect = 3e-89 Identities = 739/1091 (68%), Gaps = 43/1091 (4%) Strand=Plus/Plus Query 71299 CAGATGGCTGAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTATGATCAGCAG 71358 || |||| || || ||||| | || || | |||||||| || ||||||||||| || Sbjct 1802 CAAATGGAAGAGCCAATGTTTTTCGGCCAAACCGTTAACGTATCTCGTTATGATCAACAA 1861 Query 71359 AAGTACCCCGCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGGCGACCTGAA 71418 || ||||| || ||||| || ||||| || || ||||| || || ||||| || ||| Sbjct 1862 AAATACCCTATTTTTGAAAAACTAATTGAAAAGCAGCTTTCGTTTTTTTGGCGCCCAGAA 1921 Query 71419 GAGGTGGATGTTTCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCATGAAAAACAC 71478 || || || || ||||||| | ||||| || | || || ||||||||||| || Sbjct 1922 GAAGTAGACGTAAGCAAAGACCGCTTAGACTTTCAAGCATTACCTGATCATGAAAAGCAT 1981 Query 71479 ATCTTCGTTTCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCG 71538 || || | |||| | ||||| ||||| |||| || | || || ||| || Sbjct 1982 ATATTTTTAAGTAACTTAAAATATCAAACATTGCTTGATAGCGTACAAGGGCGTTCACCA 2041 Query 71539 AACGTGGCCTTGCTGCCGATCTGT-TCTATCCCGGAACTCGAAACCTGGATTGAAACCTG 71597 ||||||||| | || || || ||| || | || || | ||||| ||||| ||||| || Sbjct 2042 AACGTGGCCCTACTACCTAT-TGTATCGCTACCAGAGTTAGAAACATGGATAGAAACGTG 2100 Query 71598 GGCGTTCTCTGAAACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTAC 71657 |||||| |||||||||||| ||||| ||||| || || || |||||| |||| Sbjct 2101 GGCGTTTAGTGAAACGATTCATAGCCGCTCGTACACGCATATTATTCGTAAT---GTTAC 2157 Query 71658 TGA--CCCCTCCA-TCGTGTTTGATGACATCGTGACCAACGAACACATCAAAGCGCGTGC 71714 | | ||| | | | ||||||||||| || | ||| || | || | | ||||| Sbjct 2158 CCAAGCACCTGAACTTATTTTTGATGACATAGTTAGCAATGACAAAATTAGTGAACGTGC 2217 Query 71715 TGAGTCCGTCACGGAGTATTACGACCAGCTGATCGAAATGAC-CA-TGTACCT---CAAC 71769 || | || || | || ||||| |||| || | || || ||| || ||| Sbjct 2218 CGATGCGGTAACAAAATACTACGA-----TGATTTAATTAACTCAGTGTCGCTTTACAAT 2272 Query 71770 TTACTGGGTGAAGGTACTCATGTAATCAATGGTAAGAAAGTCGTGGT--CTCGATGCGTG 71827 ||| |||||||| | |||| || || ||||| || || || | || | | Sbjct 2273 TTATACGGTGAAGGCAAACATGAGATTAACGGTAAATCTGTTGTTGTTAATTTATTTGAG 2332 Query 71828 CT-ATCAAGCGTCTGGTCTACCTGTGCATCGTGTCGGTCAACGTGTTGGAAGCCATCCGC 71886 || | ||| | | |||||| || ||||||| || | || ||||| || || Sbjct 2333 CTGAAAAAGAAAC---TTTACCTGGCAATGATGTCGGTAAATATTTTAGAAGCGATTCGT 2389 Query 71887 TTCTATGTCTCGTTTGCCTGCTCGTTTGCCTTTGCTGAACGCGAGCTGATGGAAGGCAAC 71946 || |||||| ||||||||||||||||| |||||||| || || |||||||||| ||| Sbjct 2390 TTTTATGTCAGCTTTGCCTGCTCGTTTGCGTTTGCTGAGCGTGAATTGATGGAAGGTAAC 2449 Query 71947 GCCAAGATCATTAAACTGATCGCCCGTGATGAAGCCCTGCATCTGACCGGCACCCAGCAC 72006 || || || || || || || ||||| |||||||| || ||| | | ||||| ||||| Sbjct 2450 GCTAAAATAATCAAGCTTATTGCCCGCGATGAAGCGCTACATTTATCTGGCACTCAGCAT 2509 Query 72007 ATGATCATGTTAATGAAGTCCGGTGCTGACGATGCTGAGATGGCGGAAATCGTTAAAG-- 72064 || | | | ||| | |||| |||||| | || |||||| || ||| | Sbjct 2510 ATTTTAAATATTATGCAAGACGGTAAAGACGATCCAGAAATGGCG---ATTGTTGCCGCG 2566 Query 72065 -AGTGTGAAGCAGAAACATACGCACTCTTTAAGGACGCTGCAGAGCAGGAGAAAGACTGG 72123 |||| | ||| || | | ||| ||||||||||||||| || ||||| ||| Sbjct 2567 CAGTGCCGCGACGAAGCAATTAAAATGTTTGTGGACGCTGCAGAGCAAGAAAAAGAATGG 2626 Query 72124 GCGAACTATCTATTCCAGGACGGGTCGATGATCGGTCTGAACAAAGAGATCGTGTGCCAG 72183 || | || ||||| | || || || ||||| || | || ||| | || | || ||| Sbjct 2627 GCCGAGTACTTATTCAAAGATGGCTCAATGATTGGCTTAAATAAACACATTTTATGTCAG 2686 Query 72184 TACATCGAATACATCACCAACATCCGTATTCGCGCCATCGGTTACGATGACATCTACGCC 72243 ||| | |||||||| |||||| || || ||||| |||| || || | Sbjct 2687 TACGTTGAATACATTACCAACGCTCGAATGACAGCCATTGGTTTTCCTG-CA-------C 2738 Query 72244 GGTGTCAAAGC-----TAACCCAATCCCATGGATCAACTCCTGGTTGGTTTCTGACAACG 72298 || | ||| | ||| || ||||||||||| ||||| |||||||| || || |||| Sbjct 2739 AGTTTAAAAACAACAGTAATCCTATCCCATGGATAAACTCTTGGTTGGTGTCAGATAACG 2798 Query 72299 TGCAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCTTATCTGGTCGGTCAGATAGACTCGA 72358 ||||||| || ||||| |||| ||| | || || || || || ||||| ||||||||| Sbjct 2799 TGCAAGTAGCACCACAAGAAGCTGAAATTAGCTCCTACCTTGTTGGTCAAATAGACTCGC 2858 Query 72359 AAGTGGACGCC 72369 |||| || ||| Sbjct 2859 AAGTTGATGCC 2869 >seq128994 Length=861 Score = 230 bits (254), Expect = 4e-55 Identities = 509/752 (68%), Gaps = 10/752 (1%) Strand=Plus/Minus Query 71458 TTGCCAGATCATGAAAAACACATCTTCGTTTCTAACCTGAAATACCAAACCCTGCTGGAC 71517 || || || |||||| |||| || ||| | || || |||| ||||||||| || | ||| Sbjct 859 TTACCTGAACATGAACAACATATTTTCTTCTCAAATTTGAAGTACCAAACCTTGTTAGAC 800 Query 71518 TCGATTCAGGGTCGTAGCCCGAACGTGGCCTTGCTGCCGATCTGTTCTATCCCGGAACTC 71577 || ||||| || || ||||| ||||| || |||| | || | || ||| | Sbjct 799 TCAATTCAAGGCCGCTCACCGAATGTGGCATTTTTGCCTTTGGTATCGCTACCTGAATTG 740 Query 71578 GAAACCTGGATTGAAACCTGGGCGTTCTCTGAAACGATTCACTCGCGCTCATACACCCAC 71637 ||||| ||||||||||| ||| |||| |||||||| ||||||||||| || ||||| ||| Sbjct 739 GAAACGTGGATTGAAACATGGTCGTTTTCTGAAACCATTCACTCGCGTTCGTACACTCAC 680 Query 71638 ATCATCCGTAATATCTTTACTGACCCCTCCATCGTGTTTGATGACATCGTGACCAACGAA 71697 || || |||||||| ||| | |||| || | || ||||| || || || || || Sbjct 679 ATTATTCGTAATATTGTTAATAACCCATCTTTGGTATTTGACGATATTGTACAAAATGAT 620 Query 71698 CACATCAAAGCGCGTGCTGAGTCCGTCACGGAGTATTACGACCAGCTGATCGAAATGACC 71757 | || | |||||| | | | | |||||||| | | || | | ||| Sbjct 619 GAAATTTTAAAGCGTGCCGGTGATATTGCCGCTTATTACGATGACTTAATTAACCTCACC 560 Query 71758 ATGTACCTCAACTTACTGGGTGAAGGTACTCATGTAATCAATGGT-AAGAAAGT--CGTG 71814 | ||||| | |||||||| || || || ||||| ||| |||||| | ||| Sbjct 559 CAGATTAATAACTTGTTAGGTGAAGGAACGCACGTTATCAACGGTAAAGAAATTACCGTT 500 Query 71815 GTCTCGATGCGTGCTATCAAGCGTCTGGTCTACCTGTGCATCGTGTCGGTCAACGTGTTG 71874 || | | | || | || ||| | || ||||||| |||| ||||| | || Sbjct 499 AATTC-ACGTATTCT-TAAAAAGTC-ATTGTATTTGTGCATGATGTCAGTCAATGCCTTA 443 Query 71875 GAAGCCATCCGCTTCTATGTCTCGTTTGCCTGCTCGTTTGCCTTTGCTGAACG-CGAGCT 71933 ||||| || |||||||||||| |||||||| |||||||||||||||||||| || | | Sbjct 442 GAAGCGATTCGCTTCTATGTCAGTTTTGCCTGTTCGTTTGCCTTTGCTGAACGTCGTG-T 384 Query 71934 GATGGAAGGCAACGCCAAGATCATTAAACTGATCGCCCGTGATGAAGCCCTGCATCTGAC 71993 |||||||| || || || || ||| | || ||||||||||||||| | || || | Sbjct 383 TATGGAAGGTAATGCTAAAATTATTCGCTTAATTGCCCGTGATGAAGCCTTACACCTCAA 324 Query 71994 CGGCACCCAGCACATGATCATGTTAATGAAGTCCGGTGCTGACGATGCTGAGATGGCGGA 72053 | || || ||||| | | ||| || ||| ||||| | || |||| || Sbjct 323 TAGTACACAACACATTTTAGCTCTGATGCAGGGTGGTAAAGACGACCCAGAAATGGGAGA 264 Query 72054 AATCGTTAAAGAGTGTGAAGC-AGAAACATACGCACTCTTTAAGGACGCTGCAGAGCAGG 72112 ||| | | |||||| |||| |||| | || | | || | || || || || | Sbjct 263 AATTGCTGCTGAGTGT-AAGCAAGAAGCGTATGACTTATTCGTCAAAGCGGCGGAACAAG 205 Query 72113 AGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCGATGATCGGTCTGAACAAAGAGA 72172 | ||||| ||||| || || ||||| | || || |||||||| || |||| || ||| Sbjct 204 AAAAAGAATGGGCCAAGTACTTATTCAAAGATGGTTCGATGATTGGCTTGAATGAACAGA 145 Query 72173 TCGTGTGCCAGTACATCGAATACATCACCAAC 72204 | | ||||||||| | || | || || ||| Sbjct 144 TTTTATGCCAGTACGTTGAGTTTATTACTAAC 113 >seq497288 Length=389 Score = 158 bits (174), Expect = 2e-33 Identities = 170/224 (76%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 71490 TAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCCTT 71549 |||||| || || || ||||| || ||||| || || ||||||||||| ||||||| | Sbjct 329 TAACCTAAAGTATCAGACCCTACTCGACTCTATCCAAGGTCGTAGCCCAAACGTGGTGCT 270 Query 71550 GCTGCCGATCTGTTCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCTGA 71609 ||||| | ||||| || || || ||||| |||||||| || ||| |||| ||||| Sbjct 269 ATTGCCGCTGGTGTCTATTCCTGAGCTTGAAACGTGGATTGAGACGTGGACGTTTTCTGA 210 Query 71610 AACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTACTGACCCCTCCAT 71669 || |||||||||||| || ||||| ||||| |||||||| | | |||||| | || Sbjct 209 GACCATTCACTCGCGCAGCTATACCCATATCATTCGTAATATTATCAATGACCCTGCTAT 150 Query 71670 CGTGTTTGATGACATCGTGACCAACGAACACATC--AAAGCGCG 71711 ||| |||||||||||| || ||||| || ||| | |||||| Sbjct 149 CGTCTTTGATGACATCATGCAAAACGATCATATCCTAGAGCGCG 106 >seq511105 Length=248 Score = 154 bits (170), Expect = 3e-32 Identities = 162/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 71845 TACCTGTGCATCGTGTCGGTCAACGTGTTGGAAGCCATCCGCTTCTATGTCTCGTTTGCC 71904 || |||||||| || | |||||||| || ||||| || ||||| |||| ||| |||||| Sbjct 227 TATCTGTGCATTATGGCAGTCAACGTCTTAGAAGCGATTCGCTTTTATGCCTCATTTGCC 168 Query 71905 TGCTCGTTTGCCTTTGCTGAACGCGAGCTGATGGAAGGCAACGCCAAGATCATTAAACTG 71964 ||||||||||| || ||||| || | ||||||||||| |||||||| || || || || Sbjct 167 TGCTCGTTTGCGTTCGCTGAGCG-TAACTGATGGAAGGTAACGCCAAAATTATCAAGCTC 109 Query 71965 ATCGCCCGTGATGAAGCCCTGCATCTGACCGGCACCCAGCACATGATCATGTTAATGAAG 72024 || || |||||||| || || ||| | |||||||| ||||| ||| ||| | ||| Sbjct 108 ATTGCGCGTGATGAGGCGCTACATTTAACCGGCACGCAGCATATGCTCAATCTTATGCGT 49 Query 72025 TCCGGTGCTGACGATGCTGAGATGGCGGAAAT 72056 |||| |||||| | ||||||| ||||| Sbjct 48 AACGGTAAGGACGATCCAGAGATGGTAGAAAT 17 >seq353462 Length=332 Score = 120 bits (132), Expect = 5e-22 Identities = 212/305 (70%), Gaps = 8/305 (3%) Strand=Plus/Minus Query 71308 GAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTATGATCAGCAGAAGTACCCC 71367 || |||||||| | ||| | |||| ||||| | ||||| || || || ||| |||| Sbjct 301 GAGCCGATGTTTTTTGGTAATCCGGTCAACGTGGCGCGTTACGACCAACAAAAGCACCCT 242 Query 71368 GCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGAT 71427 || || | ||||||| || ||||| || ||||| ||||| || ||||| || ||| Sbjct 241 ATCTTTGAGCAATTGATTGAAAAGCAACTGTCGTTCTTTTGGCGTCCAGAAGAAGTCGAT 182 Query 71428 GTTTCGCAAGACCGTATCGACTTCCAGGGG---TTGCCAGATCATGAAAAACACATCTTC 71484 || || | || ||||| || | | || ||| | || ||| | || ||||| Sbjct 181 GTATCACGTGATCGTATGGATT---ATGGCAATTTGTCCTCACACGAACAGCATATCTTT 125 Query 71485 GTTTCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTG 71544 | |||||| || || ||||| || || ||||| || || ||||||||||| |||||| Sbjct 124 ATCAGTAACCTAAAGTATCAAACGCTACTCGACTCTATCCAAGGTCGTAGCCCAAACGTG 65 Query 71545 GCCTTGCTGCCGATCTGT-TCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTT 71603 | | |||| || || || || || || || || || |||||||| || ||| |||| Sbjct 64 GTGCTATTGCC-ATTGGTATCGATTCCTGAGCTTGAGACATGGATTGAGACGTGGACGTT 6 Query 71604 CTCTG 71608 |||| Sbjct 5 TTCTG 1 >seq522862 Length=256 Score = 93.3 bits (102), Expect = 7e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 71488 TCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCC 71547 || ||||||||||| ||||| || | |||||||| ||||||||||| || ||| |||| Sbjct 2 TCAAACCTGAAATATCAAACACTATTAGACTCGATACAGGGTCGTAGTCCTAACATGGCA 61 Query 71548 TTGCTGCCGATCTGTTCTATCCCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCT 71607 || || |||||| || | || || | || || ||||| ||||||||| | ||| | Sbjct 62 TTACTTCCGATCGTATCCTTACCTGAGTTAGAGACATGGATCGAAACCTGGTCCTTCAGT 121 Query 71608 GAAACGATTCACTCGCGCTCATACACCCACATCATCCGTAATATCTTTACTGACCCCTCC 71667 || || || ||| | ||||| || || | ||||| || || |||||| || Sbjct 122 GAGACTATCCACAGCCAGAGCTACACACATATTCTTCGTAACATATTCGATGACCCGTCT 181 Query 71668 ATCGTGTTTGATGACATCGTGACCAA 71693 ||| | ||||| || || | ||| Sbjct 182 GAAGTGCTAGATGATATTGTCAGCAA 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 861643433436480