Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023558.1 Length=38966 Score E Sequences producing significant alignments: (Bits) Value seq512931 288 2e-73 >seq512931 Length=538 Score = 288 bits (318), Expect = 2e-73 Identities = 383/529 (72%), Gaps = 31/529 (6%) Strand=Plus/Plus Query 36745 CCTGACCACTCTCCTTCGGTTAAGTCCGTAGGTATCACTGGTCAGT-TAACTGGTAGCCG 36803 ||||||||| || ||||| |||||||| ||| | ||||| | || | ||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 36804 TGCTGACATCCTGATTGCCGATGACGTAGAGGTCCCCGGTAACTCAGCTACGCAGGCAGC 36863 |||||||||||| ||||| |||||||| ||||||||||| ||||| | || ||| | || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 36864 GCGTGACCGACTGTCCGAGCTGGTGAAGGAGTTCGACGCAATCCTGAAGCCGGGTGGTAC 36923 | || | || ||||||||| ||||| ||||| || ||||||||||| | ||||| Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188 Query 36924 GGTTATCTATCTGGGTACGCCTCAGACCGAGATGACCCTATATCGTCAGCTTGAGGGCCG 36983 | | ||||| |||| || || |||||||| |||||||| || | | ||||||| ||| Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248 Query 36984 TGGATACTCGACTACCATATGGCCTGCCCGGTATCCCCGCGATGAGAAGGACTGGAAGTC 37043 || |||||||| || || |||||||| || || || || |||| | ||| |||| Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308 Query 37044 TTACGGAGAC------------------CGTCTGG---CTCCGATGCTTCAGGCTGAGCT 37082 ||| | || ||||||| | | ||||| || ||||| Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG---GAGCT 365 Query 37083 TGAGTCCGACCCTGAG-GGCTACTACTGGAGACCTACCGATGAGGTTCGCTTCGATGATG 37141 || |||| ||| ||| | ||||| ||||| || |||| |||||||||| Sbjct 366 GGAAGACGAC---GAGAAGCT-GTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATG 421 Query 37142 AGGACCTGAAGGAACGTGAGCTGTCCTACGGTAAGGCTGGCTTCGCTCTACAGTTCATGC 37201 | |||||| || || || || || || || |||| ||||||||||||||||||||||| Sbjct 422 AAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGC 481 Query 37202 TCAACCCTAACCTAGGGGATGCCGAGAAGTACCCTCTGAAGCTGCGTGA 37250 ||||||| ||||| | || |||||||||||| ||||||||||||| Sbjct 482 TCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123792243809472