Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023561.1
Length=173276
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 199 4e-46
seq506238 118 1e-21
>seq449735
Length=3187
Score = 199 bits (220), Expect = 4e-46
Identities = 336/485 (69%), Gaps = 6/485 (1%)
Strand=Plus/Minus
Query 145895 AACAGAGTGATGTAATCGTCTTTAATCAGACGTTCAAACATCAGGTCGTTGATTTGAACA 145954
|||| || ||||| ||||||||||| | ||| |||| || | || | || ||
Sbjct 482 AACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACG 423
Query 145955 CCGTAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTGAGTACGAGG 146014
|||||||| || ||||| | ||||| ||||| || || ||| || || ||||| |
Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363
Query 146015 AGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAATGTCGCCGCGCCACCGCGAACT 146074
|||||||| ||||| || ||||| | || ||| |||| || || ||||| || || ||
Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303
Query 146075 CCACCTTGGGAGCAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAAGGAATAACTCCA 146134
|| ||||| || || ||||| |||||||| | ||| || | ||||||||| ||
Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243
Query 146135 GTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATCATACCTGCGTTA 146194
||||| | |||| || || || | ||| ||||||||| ||||||||||
Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183
Query 146195 ATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGATTCAGCAGATTT---GTTA 146251
||||| || || ||||||| || | ||| | ||||||| ||| || | ||||
Sbjct 182 ATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG---CAGACGAGGTGGCGTTA 126
Query 146252 ATTGATTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATTGACGAGTAGGA 146311
||||| | || || ||| || || | || || || || || || || || ||
Sbjct 125 ATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGC 66
Query 146312 GTACGAGCACCTGCCATAATAGGAGTAGGCAGAGAAATTTTCTTAGTTGACACAGCATCG 146371
|||||| ||||||||||||| || ||||| || |||||||| ||| | ||||||
Sbjct 65 GTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTTTAAACAATGAAATCGCATCG 6
Query 146372 TAAAA 146376
|||||
Sbjct 5 TAAAA 1
>seq506238
Length=275
Score = 118 bits (130), Expect = 1e-21
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 61351 GTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACG 61410
|| || || |||| | ||||| ||||||| ||||| |||| | |||||||| ||
Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111
Query 61411 GCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 61470
|| || || || ||||||||||| | || ||||||||||| || |||| ||| ||||||
Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171
Query 61471 TCTAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTC 61520
|| || ||||| | | ||| |||||||| ||||| || ||||||||
Sbjct 172 TCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 550713765421120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |