Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq449735 199 4e-46 seq506238 118 1e-21 >seq449735 Length=3187 Score = 199 bits (220), Expect = 4e-46 Identities = 336/485 (69%), Gaps = 6/485 (1%) Strand=Plus/Minus Query 145895 AACAGAGTGATGTAATCGTCTTTAATCAGACGTTCAAACATCAGGTCGTTGATTTGAACA 145954 |||| || ||||| ||||||||||| | ||| |||| || | || | || || Sbjct 482 AACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACG 423 Query 145955 CCGTAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTGAGTACGAGG 146014 |||||||| || ||||| | ||||| ||||| || || ||| || || ||||| | Sbjct 422 CCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAAC 363 Query 146015 AGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAATGTCGCCGCGCCACCGCGAACT 146074 |||||||| ||||| || ||||| | || ||| |||| || || ||||| || || || Sbjct 362 AGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACA 303 Query 146075 CCACCTTGGGAGCAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAAGGAATAACTCCA 146134 || ||||| || || ||||| |||||||| | ||| || | ||||||||| || Sbjct 302 CCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCC 243 Query 146135 GTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATCATACCTGCGTTA 146194 ||||| | |||| || || || | ||| ||||||||| |||||||||| Sbjct 242 GTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTA 183 Query 146195 ATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGATTCAGCAGATTT---GTTA 146251 ||||| || || ||||||| || | ||| | ||||||| ||| || | |||| Sbjct 182 ATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG---CAGACGAGGTGGCGTTA 126 Query 146252 ATTGATTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATTGACGAGTAGGA 146311 ||||| | || || ||| || || | || || || || || || || || || Sbjct 125 ATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGC 66 Query 146312 GTACGAGCACCTGCCATAATAGGAGTAGGCAGAGAAATTTTCTTAGTTGACACAGCATCG 146371 |||||| ||||||||||||| || ||||| || |||||||| ||| | |||||| Sbjct 65 GTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTTTAAACAATGAAATCGCATCG 6 Query 146372 TAAAA 146376 ||||| Sbjct 5 TAAAA 1 >seq506238 Length=275 Score = 118 bits (130), Expect = 1e-21 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 61351 GTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACGAACG 61410 || || || |||| | ||||| ||||||| ||||| |||| | |||||||| || Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111 Query 61411 GCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 61470 || || || || ||||||||||| | || ||||||||||| || |||| ||| |||||| Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171 Query 61471 TCTAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTC 61520 || || ||||| | | ||| |||||||| ||||| || |||||||| Sbjct 172 TCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550713765421120