Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023570.1 Length=40739 Score E Sequences producing significant alignments: (Bits) Value seq516303 161 3e-35 >seq516303 Length=336 Score = 161 bits (178), Expect = 3e-35 Identities = 238/336 (71%), Gaps = 1/336 (0%) Strand=Plus/Minus Query 18036 AAGGATGATGCAACTGAATCTGAACTTGAGATTTTCCAACTATGGAAATCTCGTATGGCA 18095 |||||||| |||| || ||||| | || ||| | | |||||| | | ||| Sbjct 335 AAGGATGAGGCAAGCGAGTCTGAGTTGGAACAGTTCAAGTTCTGGAAAACCCAGATGAGT 276 Query 18096 GCTTGGTACACGGCTGAGAATAAACGCAAAGGTCGTCATACAGGCATTTTAATTAAGTTA 18155 ||||||||||| |||||||| ||||| || ||||||||| ||| || | | |||| | Sbjct 275 GCTTGGTACACTGCTGAGAACAAACGTAAGGGTCGTCATGTAGGTATCCTGAGTAAGCTC 216 Query 18156 CGTGAACTCACACGATACAAGGACGAGGAGGCTCTGTACTTCCCAACATTCATCGACTGG 18215 || | | || || | ||||||| || |||||||||||||| || || || ||| Sbjct 215 ACAGAGTTAGCTCGTTATCAAGACGAGGTAGCCCTGTACTTCCCAACCTTTATTGATTGG 156 Query 18216 CGTGGTCGCCTGTACTTCCGTAGTGCATTGAATCCACAAGCCAATGATGCTGTGAAGGGG 18275 ||||| || ||||||| | ||| |||||||||| || || || | || || || Sbjct 155 CGTGGACGATTGTACTTTAGAAGTAACTTGAATCCAC-AGTCATCTATTCAGTCAAAGGT 97 Query 18276 TGCTTAGAGTTCGCCAATGGCAAGCCTCTTGGTAAAGATGGTTTGTTCTGGTTGAAGGTA 18335 || | |||||||| | || || | ||| ||| ||||||| | | ||||| || | Sbjct 96 TGTCTTGAGTTCGCTGAGGGTAAACGTCTAGGTTCAGATGGTCTTATGTGGTTAAAAGCT 37 Query 18336 CACGTAGCGAATTGCTGTGGTTATGATAAGCATGAC 18371 || ||||| || ||||||||||||||||| || ||| Sbjct 36 CATGTAGCTAACTGCTGTGGTTATGATAAACACGAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129430438637724