Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_023576.1 Length=39207 Score E Sequences producing significant alignments: (Bits) Value seq512931 212 2e-50 >seq512931 Length=538 Score = 212 bits (234), Expect = 2e-50 Identities = 366/528 (69%), Gaps = 29/528 (5%) Strand=Plus/Plus Query 36577 CCAGACCACTCACCTTCGGTTAAATCCGTTGGTATCACTGGTCAGT-TGACTGGTAGTCG 36635 || |||||| || ||||| || ||||| ||| | ||||| | || |||||||||| || Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 36636 TGCTGACATCCTGATTGCCGATGACGTGGAGGTTCCTAACAACTCAGCGACTCAGGCTGC 36695 |||||||||||| ||||| |||||||| ||||| || |||||| | || ||| | || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 36696 ACGAGACCGTCTGTCAGAGCTTGTGAAAGAGTTCGACGCTATCCTGAAGCCGGGAGGTAC 36755 | | || | || ||||| || || || ||||| || ||||||||||| | ||||| Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188 Query 36756 AATCATCTATCTAGGTACTCCTCAGAACGAGATGACCTTGTATCGTGAGCTTGAAGGTCG 36815 |||||||| | || || || |||| ||| |||||| | || | || ||||| | || Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248 Query 36816 TGGGTATACCACTACTATCTGGCCTGCTCGTTATCCACGCGA-----CAG-------GAA 36863 || || | || || ||||||||||| || || || || || | | | Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308 Query 36864 GGACTGGCAGTCTTACGGCGA------CCGTCTGG---CTCCTATGCTTCAGGCAGAACT 36914 ||||||| | | ||| | ||||||| | | ||||| || || || Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG---GAGCT 365 Query 36915 GGAAGAGGACCCTGAGTCCTTCTACTGGCGTCCGACCGACGAAGTACGATTTGATGATAC 36974 |||||| ||| ||| | | |||| || || ||| | ||||| |||||| Sbjct 366 GGAAGACGAC---GAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGA 422 Query 36975 GGACCTGAAGGAACGTGAGCTGTCCTATGGTAAAGCTGGCTTCGCTCTACAGTTCATGCT 37034 |||||| || || || || || ||||| || | |||||||||||||||||||||||| Sbjct 423 AGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCT 482 Query 37035 TAACCCGAACCTGAGTGATGCAGAGAAGTACCCTCTGAAGCTCCGTGA 37082 ||||||||||| || || ||||||||||| ||||||| ||||| Sbjct 483 CAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124558631262156